TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Standing height
:
←
→
chr13:39,290,569-41,063,028
Best TWAS P=5.97e-09 · Best GWAS P=3.61e-10 conditioned to 0.0406
39.2M
39.4M
39.6M
39.8M
40M
40.2M
40.4M
40.6M
40.8M
41M
0
2
4
6
8
10
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
STOML3
0.03
0.01
blup
75
0.02
6.6e-03
-6.1
5.8
6.0e-09
-0.81
0.01
0.93
TRUE
4
The Cancer Genome Atlas
Stomach Adenocarcinoma
COG6
0.05
0.00
blup
99
0.02
8.2e-03
-4.1
-5.6
2.6e-08
0.06
0.04
0.12
TRUE
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
STOML3
0.03
0.01
lasso
3
0.02
6.6e-03
-5.7
5.8
7.7e-09
-0.90
0.01
0.87
FALSE
1
GTEx
Whole Blood
COG6
0.10
0.07
lasso
4
0.08
7.0e-08
4.8
-5.5
3.7e-08
0.09
0.25
0.74
FALSE