Best TWAS P=1.84e-07 · Best GWAS P=1.43e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | ADD3 | 0.12 | 0.1 | lasso | 3 | 0.11 | 9.4e-07 | 5.0 | 5.2 | 1.9e-07 | 0.93 | 0.02 | 0.97 | FALSE |
2 | GTEx | Thyroid | ADD3 | 0.06 | 0.0 | enet | 4 | 0.01 | 1.2e-01 | 5.1 | 5.2 | 1.8e-07 | 0.97 | 0.02 | 0.87 | TRUE |