TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Qualifications: College or University degree
:
←
→
chr13:98,109,395-99,925,872
Best TWAS P=5.36e-10 · Best GWAS P=7.96e-08 conditioned to 0.801
98.5M
99M
99.5M
100M
0
2
4
6
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Adipose Subcutaneous
STK24
0.18
0.06
lasso
8
0.08
2.4e-07
5.2
6.2
5.4e-10
-0.84
0.02
0.98
TRUE
1
CommonMind
Brain Pre-frontal Cortex
FARP1
0.10
0.05
enet
5
0.05
1.4e-06
5.3
-5.6
1.7e-08
0.71
0.02
0.98
FALSE
4
NTR
Blood
FARP1
0.02
0.01
lasso
3
0.01
4.3e-04
4.8
5.4
6.6e-08
-0.57
0.05
0.93
FALSE
3
GTEx
Esophagus Mucosa
FARP1-AS1
0.11
0.03
lasso
2
0.04
1.7e-03
5.3
5.2
1.7e-07
-0.58
0.02
0.98
FALSE