Best TWAS P=2.42e-09 · Best GWAS P=1.07e-13 conditioned to 6.73e-13
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | GUCY1A3 | 0.29 | 0.12 | lasso | 6 | 0.19 | 1.7e-10 | -5 | 5.5 | 3.6e-08 | -0.01 | 0.99 | 0.00 | FALSE |
2 | GTEx | Artery Aorta | RP11-588K22.2 | 0.22 | 0.11 | lasso | 11 | 0.11 | 1.6e-06 | -5 | 6.0 | 2.4e-09 | 0.04 | 0.73 | 0.05 | TRUE |