Best TWAS P=3.52e-09 · Best GWAS P=1.33e-09 conditioned to 0.000661
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | NCALD | 0.24 | 0.20 | lasso | 5 | 0.19 | 9.2e-09 | 5.5 | -5.6 | 2.5e-08 | -0.72 | 0.06 | 0.93 | FALSE |
| 2 | GTEx | Testis | KB-1107E3.1 | 0.26 | 0.08 | enet | 31 | 0.10 | 2.8e-05 | 5.5 | -5.9 | 3.5e-09 | -0.54 | 0.07 | 0.88 | TRUE |