Best TWAS P=1.03e-08 · Best GWAS P=2.21e-08 conditioned to 0.14
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Breast Mammary Tissue (Female) | GLTP | 0.14 | 0.06 | lasso | 6 | 0.06 | 0.0077 | -5.6 | -5.7 | 1e-08 | 0.83 | 0.02 | 0.83 | TRUE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | TCHP | 0.05 | 0.01 | blup | 56 | 0.03 | 0.0014 | 4.4 | -5.7 | 1e-08 | 0.76 | 0.04 | 0.60 | FALSE |