Best TWAS P=1.76e-07 · Best GWAS P=3.96e-09 conditioned to 0.00022
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | TRIM38 | 0.08 | 0 | lasso | 9 | 0.00 | 0.3730 | -4.4 | -5.2 | 1.8e-07 | 0.38 | 0.17 | 0.46 | TRUE |
2 | GTEx | Skin Sun Exposed Lower leg | TRIM38 | 0.09 | 0 | enet | 21 | 0.02 | 0.0063 | -3.0 | -5.1 | 2.7e-07 | 0.28 | 0.30 | 0.10 | TRUE |