Best TWAS P=8.35e-17 · Best GWAS P=2.73e-18 conditioned to 7.11e-09
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Visceral Omentum | ERMP1 | 0.10 | 0.04 | enet | 9 | 0.03 | 0.0118 | -5.2 | 5.8 | 6.3e-09 | -0.08 | 0.31 | 0.03 | FALSE |
2 | ROSMAP | Brain Pre-frontal Cortex | RANBP6 | 0.07 | 0.01 | blup | 396 | 0.02 | 0.0017 | -4.5 | 8.3 | 8.4e-17 | 0.06 | 0.89 | 0.00 | TRUE |
3 | ROSMAP | Brain Pre-frontal Cortex | GLDC | 0.11 | 0.00 | enet | 5 | 0.01 | 0.0074 | 8.7 | 5.9 | 4.2e-09 | 0.70 | 0.01 | 0.88 | TRUE |