TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Hayfever, allergic rhinitis or eczema
:
←
→
chr12:122,942,185-124,424,636
Best TWAS P=2.5e-08 · Best GWAS P=2.35e-07 conditioned to 0.484
123M
123.2M
123.4M
123.6M
123.8M
124M
124.2M
124.4M
0
2
4
6
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Esophagus Muscularis
MPHOSPH9
0.18
0.18
enet
17
0.18
4.8e-11
-5.0
-5.6
2.5e-08
0.92
0.02
0.98
TRUE
2
The Cancer Genome Atlas
Stomach Adenocarcinoma
MLXIP
0.06
0.02
blup
68
0.04
1.2e-03
4.1
5.1
3.1e-07
0.05
0.08
0.41
TRUE