TWAS
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Traits
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Hayfever, allergic rhinitis or eczema
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chr1:160,452,218-161,885,352
Best TWAS P=2.47e-09 · Best GWAS P=1.43e-09 conditioned to 0.156
160.4M
160.6M
160.8M
161M
161.2M
161.4M
161.6M
161.8M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Cells Transformed fibroblasts
PPOX
0.14
0.14
lasso
4
0.13
6.0e-10
5.9
6.0
2.5e-09
0.93
0
1
TRUE
3
GTEx
Cells Transformed fibroblasts
ADAMTS4
0.35
0.22
lasso
7
0.26
1.5e-19
5.9
6.0
2.7e-09
0.92
0
1
FALSE
6
YFS
Blood
FCER1G
0.46
0.42
lasso
8
0.45
4.2e-166
6.1
5.8
7.6e-09
0.97
0
1
FALSE
4
METSIM
Adipose
FCER1G
0.15
0.11
enet
15
0.12
6.3e-17
6.1
5.5
2.9e-08
0.93
0
1
FALSE
5
NTR
Blood
FCER1G
0.17
0.14
lasso
6
0.16
3.4e-49
6.1
5.5
3.8e-08
0.96
0
1
FALSE
2
GTEx
Cells Transformed fibroblasts
B4GALT3
0.31
0.28
enet
16
0.30
2.0e-22
5.9
5.4
6.8e-08
0.90
0
1
FALSE