Best TWAS P=1.64e-08 · Best GWAS P=1.78e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | COX8A | 0.06 | 0.00 | bslmm | 323 | 0.02 | 8.0e-04 | 2.0 | -5.5 | 3.7e-08 | -0.18 | 0.12 | 0.12 | TRUE |
2 | ROSMAP | Brain Pre-frontal Cortex | VEGFB | 0.10 | 0.07 | enet | 6 | 0.05 | 1.5e-07 | 5.2 | -5.7 | 1.6e-08 | -0.96 | 0.00 | 1.00 | TRUE |