Hub : Traits :

Cholesterol lowering medication

165 significantly associated models · 68 unique genes.

Significant Loci

# chr p0 p1 # assoc genes # joint genes best TWAS P best SNP P cond SNP P % var exp joint genes
1 1 15752716 17413769 3 1 3.6e-08 1.1e-07 4.6e-01 98 C1orf89
2 1 26327671 27882335 3 1 1.8e-08 3.3e-06 5.3e-01 98 PIGV
3 1 62207254 63844736 3 1 8.2e-11 2.4e-10 3.8e-01 98 DOCK7
4 1 108854166 110733794 6 1 4.4e-32 9.3e-32 1.0e+00 100 PSRC1
5 2 20529948 21958745 1 1 2.1e-25 9.5e-26 1.0e+00 100 APOB
6 2 26883355 28414302 4 1 3.7e-14 7.1e-14 1.0e+00 100 FNDC4
7 2 43791363 44307450 1 1 5.4e-08 1.9e-17 1.8e-12 31 ABCG5
8 5 73969058 75594743 4 1 1.6e-14 1.5e-14 5.8e-02 94 HMGCR
9 6 160071844 161571560 2 2 3.2e-12 5.0e-15 1.5e-04 76 SLC22A3
10 8 18003897 18505600 1 1 1.3e-07 1.6e-10 2.4e-04 67 NAT2
11 8 19547307 20071503 1 1 3.2e-08 5.2e-09 2.4e-03 73 LPL
12 9 106846396 108380721 1 1 2.8e-07 3.1e-07 6.4e-02 87 ABCA1
13 9 135883620 136399075 1 1 1.1e-09 1.3e-09 5.7e-03 79 ABO
14 11 63044593 64701030 2 2 1.6e-08 1.8e-07 1.0e+00 100 COX8A VEGFB
15 11 115953897 117800682 5 2 4.1e-25 2.2e-29 3.2e-01 99 PAFAH1B2 ZNF259
16 13 46645740 48066565 1 1 1.9e-07 5.5e-08 1.0e+00 100 ESD
17 13 114052470 115106996 1 1 6.2e-08 2.7e-05 1.3e-01 87 RASA3
18 16 71374298 72800567 3 1 7.9e-08 2.0e-07 1.0e+00 100 TXNL4B
19 17 27207120 28933576 5 1 1.8e-08 3.7e-08 2.6e-01 96 GIT1
20 19 9982334 12196190 10 9 1.6e-15 1.4e-42 5.0e-07 86 C19orf80 CDKN2D KANK2 RGL3 SMARCA4 SPC24
21 19 44649590 46098885 3 3 2.3e-13 2.1e-86 6.7e-65 25 APOC2 PVRL2 TOMM40
22 19 48918157 49424381 1 1 1.5e-09 9.2e-07 2.9e-01 95 NTN5
23 20 39567774 40229720 2 1 4.0e-08 1.9e-07 6.1e-02 87 LPIN3
24 20 62008975 62912463 3 1 8.1e-09 1.8e-08 4.0e-01 98 OPRL1

Pleiotropic Associations

Trait chisq ratio # genes+ # genes++ % genes++ corr corr P genes
Bipolar Disorder (2018) 1.39 1 0 0.0 0.00 1.0e+00 FNDC4
Intelligence (Savage-Jansen 2018) 1.04 2 0 0.0 0.00 1.0e+00 GIT1 TXNL4B
Schizophrenia vs Biploar Disorder 0.97 1 0 0.0 0.00 1.0e+00 FNDC4
Alzheimer’s Disease (in mother) 6.30 3 3 6.7 0.00 1.0e+00 APOC2 PVRL2 TOMM40
Alzheimer’s Disease (in father) 2.81 3 1 2.2 0.00 1.0e+00 APOC2 PVRL2 TOMM40
Alzheimer’s Disease (including proxy) 10.15 3 3 6.7 0.00 1.0e+00 APOC2 PVRL2 TOMM40
Crohns Disease (2017) 1.88 2 2 4.4 0.00 1.0e+00 FNDC4 NTN5
Irritable Bowel Disease (IBD) 1.37 3 1 2.2 0.00 1.0e+00 FNDC4 NTN5 OPRL1
Ulcerative Colitis (UC) 1.07 1 1 2.2 0.00 1.0e+00 OPRL1
Breast Cancer 1.05 1 0 0.0 0.00 1.0e+00 OPRL1
Ovarian Cancer 1.49 1 0 0.0 0.00 1.0e+00 ABO
Coronary Artery Disease (CAD) 7.25 6 3 6.7 0.97 4.3e-04 ABO LPL PSRC1 SLC22A3 SMARCA4 ZNF259
Crohns Disease (2012) 1.29 1 0 0.0 0.00 1.0e+00 FNDC4
Fasting Glucose 3.61 1 1 2.2 0.00 1.0e+00 FNDC4
HbA1C 1.32 1 0 0.0 0.00 1.0e+00 VEGFB
HDL Cholesterol 13.78 9 4 8.9 -0.50 1.7e-01 ABCA1 APOB APOC2 LPL PIGV PSRC1 PVRL2 TOMM40 ZNF259
LDL Cholesterol 61.15 24 18 40.0 0.92 4.7e-12 ABCA1 ABCG5 ABO APOB APOC2 C19orf80 CDKN2D DOCK7 FNDC4 HMGCR KANK2 LPIN3 NTN5 PAFAH1B2 PIGV PSRC1 PVRL2 RGL3 SLC22A3 SMARCA4 SPC24 TOMM40 TXNL4B ZNF259
Primary Biliary Cirrhosis 2.13 2 0 0.0 0.00 1.0e+00 CDKN2D SMARCA4
Rheumatoid Arthritis 1.50 2 0 0.0 0.00 1.0e+00 KANK2 OPRL1
Triglycerides 40.01 11 7 15.6 0.76 6.2e-03 APOB APOC2 DOCK7 FNDC4 LPL NAT2 PAFAH1B2 PVRL2 SLC22A3 TXNL4B ZNF259
Type 2 Diabetes (T2D) (2012) 1.70 1 0 0.0 0.00 1.0e+00 VEGFB
Blood Eosinophil Count 1.78 12 6 13.3 -0.32 2.9e-01 ABO APOC2 CDKN2D DOCK7 LPL OPRL1 PAFAH1B2 PIGV RASA3 SMARCA4 TOMM40 ZNF259
Blood Platelet Count 3.23 15 10 22.2 0.07 8.0e-01 APOC2 COX8A DOCK7 FNDC4 GIT1 HMGCR LPIN3 LPL NTN5 PAFAH1B2 PIGV PVRL2 TOMM40 TXNL4B ZNF259
Blood Red Count 1.59 8 6 13.3 -0.18 6.7e-01 ABCG5 ABO FNDC4 GIT1 LPIN3 PVRL2 TXNL4B VEGFB
Blood White Count 2.77 11 4 8.9 -0.11 7.4e-01 ABO DOCK7 FNDC4 GIT1 KANK2 LPIN3 PAFAH1B2 PVRL2 RASA3 SMARCA4 VEGFB
Heel T-Score 1.33 6 3 6.7 -0.83 4.1e-02 ABO DOCK7 GIT1 HMGCR LPIN3 PSRC1
BMI 1.65 8 4 8.9 -0.22 6.0e-01 FNDC4 GIT1 HMGCR KANK2 LPL OPRL1 SLC22A3 TXNL4B
Height 1.62 16 11 24.4 -0.73 2.3e-04 ABCG5 ABO APOC2 C1orf89 CDKN2D FNDC4 GIT1 KANK2 LPL NTN5 PIGV PSRC1 SLC22A3 SMARCA4 SPC24 ZNF259
Waist Hip Ratio (WHR) 3.48 9 5 11.1 0.86 1.6e-03 ABCA1 KANK2 LPIN3 LPL NTN5 OPRL1 SLC22A3 SMARCA4 VEGFB
Systolic Blood Pressure 2.09 10 3 6.7 0.95 3.3e-05 FNDC4 NTN5 OPRL1 PAFAH1B2 PIGV RGL3 SLC22A3 SMARCA4 TOMM40 VEGFB
Allergy or Eczema 1.48 4 1 2.2 0.99 1.1e-02 ABO APOC2 FNDC4 PVRL2
Cardiovascular Disease 9.43 23 18 40.0 0.98 7.9e-18 ABCG5 APOB C1orf89 DOCK7 FNDC4 GIT1 HMGCR LPL NAT2 NTN5 OPRL1 PAFAH1B2 PIGV PSRC1 PVRL2 RGL3 SLC22A3 SMARCA4 SPC24 TOMM40 TXNL4B VEGFB ZNF259
Hypothyroidism (self reported) 1.27 2 0 0.0 0.00 1.0e+00 GIT1 NTN5
Type 2 Diabetes (T2D) (2018) 2.84 3 1 2.2 0.00 1.0e+00 FNDC4 LPL VEGFB
Lung FEV1/FVC ratio 2.34 6 4 8.9 -0.04 9.3e-01 ABO C1orf89 COX8A GIT1 NTN5 PSRC1
Lung FVC 0.98 4 1 2.2 -0.52 4.8e-01 ABO FNDC4 OPRL1 PVRL2
Chronotype (morning person) 1.03 1 0 0.0 0.00 1.0e+00 NTN5
Hair Pigment 0.22 4 0 0.0 0.70 1.9e-01 FNDC4 OPRL1 PIGV SMARCA4
Tanning 0.25 1 1 2.2 0.00 1.0e+00 FNDC4
Hand grip strength (left) 1.06 2 0 0.0 0.00 1.0e+00 ABO PVRL2
Number of treatments/medications taken 3.77 3 0 0.0 0.00 1.0e+00 FNDC4 NTN5 PSRC1
Average weekly spirits intake 1.22 1 0 0.0 0.00 1.0e+00 NTN5
Relative age of first facial hair 1.34 1 1 2.2 0.00 1.0e+00 FNDC4
Systolic blood pressure, automated reading 1.32 2 1 2.2 0.00 1.0e+00 OPRL1 PIGV
Angina 6.61 9 1 2.2 0.99 3.1e-08 ABCG5 APOC2 C19orf80 GIT1 LPL OPRL1 PSRC1 SLC22A3 SPC24
Medication: Metformin 2.65 3 1 2.2 0.00 1.0e+00 ABO FNDC4 LPL
Diabetes (father) 1.82 1 0 0.0 0.00 1.0e+00 FNDC4
Diabetes (mother) 2.57 2 0 0.0 0.00 1.0e+00 FNDC4 PVRL2
Impedance of leg (right) 1.31 4 2 4.4 0.98 2.4e-02 C1orf89 FNDC4 HMGCR OPRL1
Leg fat-free mass (left) 2.23 4 3 6.7 -0.99 2.0e-03 FNDC4 HMGCR SLC22A3 SMARCA4
Trunk fat percentage 1.26 5 2 4.4 -0.47 4.3e-01 ABO HMGCR PVRL2 SLC22A3 TXNL4B
Hand grip strength (right) 1.40 4 0 0.0 -0.60 4.0e-01 ABO FNDC4 PVRL2 SLC22A3
Age when periods started (menarche) 1.00 1 0 0.0 0.00 1.0e+00 NTN5
Heel bone mineral density (BMD) T-score, automated (left) 1.13 2 0 0.0 0.00 1.0e+00 ABO GIT1
High blood pressure 2.44 6 3 6.7 0.62 1.9e-01 ABO GIT1 NTN5 OPRL1 PIGV VEGFB
Hayfever, allergic rhinitis or eczema 1.34 2 0 0.0 0.00 1.0e+00 ABO PVRL2
Sitting height 1.51 9 2 4.4 -0.61 4.5e-02 ABCG5 FNDC4 KANK2 NTN5 PIGV SLC22A3 SMARCA4 SPC24 TXNL4B
High blood pressure (mother) 1.54 1 1 2.2 0.00 1.0e+00 PIGV
Body mass index (BMI) 1.47 5 1 2.2 -0.46 4.3e-01 FNDC4 GIT1 HMGCR PVRL2 TXNL4B
Impedance of leg (left) 1.38 5 2 4.4 0.76 1.4e-01 C1orf89 FNDC4 HMGCR LPL OPRL1
Leg predicted mass (left) 2.24 4 3 6.7 -0.99 1.9e-03 FNDC4 HMGCR SLC22A3 SMARCA4
Trunk fat mass 1.36 5 2 4.4 -0.52 2.9e-01 ABO HMGCR PVRL2 SLC22A3 TXNL4B
Waist circumference 1.26 4 1 2.2 -0.66 3.4e-01 FNDC4 HMGCR PVRL2 TXNL4B
Number of incorrect matches in round 1.24 2 0 0.0 0.00 1.0e+00 GIT1 NAT2
Alcohol usually taken with meals 1.10 1 0 0.0 0.00 1.0e+00 LPIN3
Had menopause 1.44 1 0 0.0 0.00 1.0e+00 LPL
Had other major operations 1.42 1 0 0.0 0.00 1.0e+00 ABCG5
Forced vital capacity (FVC) 1.12 3 1 2.2 0.00 1.0e+00 GIT1 PVRL2 SMARCA4
Heel bone mineral density (BMD) T-score, automated (right) 1.13 2 0 0.0 0.00 1.0e+00 ABO GIT1
Qualifications: None of the above 0.88 1 0 0.0 0.00 1.0e+00 RASA3
Mouth/teeth dental problems 1.19 1 0 0.0 0.00 1.0e+00 NTN5
Heart attack 5.48 6 1 2.2 0.98 3.8e-04 C19orf80 GIT1 LPL PSRC1 SLC22A3 SPC24
Allergy 1.52 1 1 2.2 0.00 1.0e+00 ABO
Diabetes (self-reported) 2.44 1 1 2.2 0.00 1.0e+00 FNDC4
Medication: Ramipril 1.99 1 0 0.0 0.00 1.0e+00 SLC22A3
Medication: Simvastatin 22.74 26 20 44.4 0.99 2.7e-24 ABCG5 ABO APOB APOC2 C19orf80 COX8A DOCK7 FNDC4 HMGCR LPIN3 LPL NAT2 NTN5 OPRL1 PAFAH1B2 PIGV PSRC1 PVRL2 RGL3 SLC22A3 SMARCA4 SPC24 TOMM40 TXNL4B VEGFB ZNF259
Illnesses of siblings 2.65 1 0 0.0 0.00 1.0e+00 GIT1
Weight 1.84 5 3 6.7 -0.81 5.0e-02 FNDC4 HMGCR SLC22A3 SMARCA4 TXNL4B
Impedance of arm (right) 2.09 5 3 6.7 0.82 9.0e-02 ABO FNDC4 HMGCR KANK2 OPRL1
Arm fat percentage (right) 1.45 5 2 4.4 0.02 9.7e-01 ABO GIT1 HMGCR PVRL2 TXNL4B
Trunk fat-free mass 2.73 8 6 13.3 -0.87 1.1e-03 ABO FNDC4 HMGCR NTN5 PSRC1 SLC22A3 SMARCA4 SPC24
Hip circumference 1.87 7 3 6.7 -0.82 1.3e-02 ABCA1 FNDC4 HMGCR OPRL1 SLC22A3 TXNL4B VEGFB
Alcohol intake versus 10 years previously 2.25 2 1 2.2 0.00 1.0e+00 FNDC4 NTN5
Father's age at death 2.62 3 0 0.0 0.00 1.0e+00 ABO LPL PSRC1
Hair/balding pattern: Pattern 3 0.80 1 0 0.0 0.00 1.0e+00 LPIN3
Forced expiratory volume in 1-second (FEV1) 1.04 4 0 0.0 -0.04 9.4e-01 ABO OPRL1 PVRL2 SMARCA4
Pulse rate 1.98 1 1 2.2 0.00 1.0e+00 FNDC4
Serious illness, injury or assault of a close relative in last 2 years 1.66 1 0 0.0 0.00 1.0e+00 NTN5
Mouth/teeth dental problems: Dentures 1.48 1 1 2.2 0.00 1.0e+00 NTN5
Asthma 1.21 1 0 0.0 0.00 1.0e+00 SMARCA4
Medication: Cholesterol lowering 24.71 25 18 40.0 0.98 1.8e-20 ABCG5 ABO APOB APOC2 C19orf80 DOCK7 FNDC4 HMGCR KANK2 LPL NAT2 NTN5 OPRL1 PAFAH1B2 PIGV PSRC1 PVRL2 RGL3 SLC22A3 SMARCA4 SPC24 TOMM40 TXNL4B VEGFB ZNF259
Forced expiratory volume in 1-second (FEV1), Best measure 1.08 3 0 0.0 -0.68 3.2e-01 ABO PVRL2 SMARCA4
Pulse wave Arterial Stiffness index 1.55 1 0 0.0 0.00 1.0e+00 VEGFB
Impedance of arm (left) 2.16 5 3 6.7 0.83 7.9e-02 ABO FNDC4 HMGCR KANK2 OPRL1
Arm fat mass (right) 1.59 6 1 2.2 -0.59 1.6e-01 ABO FNDC4 HMGCR PVRL2 SLC22A3 TXNL4B
Trunk predicted mass 2.73 8 6 13.3 -0.87 1.1e-03 ABO FNDC4 HMGCR NTN5 PSRC1 SLC22A3 SMARCA4 SPC24
Standing height 1.81 12 6 13.3 -0.71 3.3e-03 ABCG5 APOC2 CDKN2D FNDC4 GIT1 KANK2 NTN5 PIGV PSRC1 SLC22A3 SMARCA4 SPC24
Seen doctor (GP) for nerves, anxiety, tension or depression 1.37 1 1 2.2 0.00 1.0e+00 LPIN3
Hair/balding pattern: Pattern 4 0.89 1 0 0.0 0.00 1.0e+00 LPIN3
Birth weight of first child 1.73 2 0 0.0 0.00 1.0e+00 OPRL1 SMARCA4
Peak expiratory flow (PEF) 1.51 3 2 4.4 0.00 1.0e+00 ABO GIT1 NTN5
Pulse wave reflection index 1.99 1 0 0.0 0.00 1.0e+00 SLC22A3
Blood clot in the leg (DVT) 8.00 1 1 2.2 0.00 1.0e+00 ABO
Medication for cholesterol, blood pressure or diabetes 9.27 17 5 11.1 -0.99 1.9e-14 APOB C19orf80 FNDC4 GIT1 HMGCR LPL NAT2 NTN5 OPRL1 PAFAH1B2 PIGV PSRC1 SMARCA4 SPC24 TOMM40 TXNL4B ZNF259
Gout (self-reported) 4.05 1 1 2.2 0.00 1.0e+00 FNDC4
Birth weight 1.45 1 0 0.0 0.00 1.0e+00 NTN5
High blood pressure (siblings) 1.94 2 0 0.0 0.00 1.0e+00 FNDC4 GIT1
Forced vital capacity (FVC), Best measure 1.15 3 0 0.0 0.00 1.0e+00 GIT1 PVRL2 SMARCA4
Body fat percentage 1.24 5 1 2.2 -0.05 9.4e-01 ABO GIT1 HMGCR PVRL2 TXNL4B
Leg fat percentage (right) 1.25 4 2 4.4 0.38 6.2e-01 GIT1 HMGCR KANK2 TXNL4B
Arm fat-free mass (right) 2.58 7 5 11.1 -0.88 1.9e-03 ABO FNDC4 HMGCR NTN5 PSRC1 SLC22A3 SMARCA4
Comparative body size at age 10 0.97 1 1 2.2 0.00 1.0e+00 NTN5
Number of children fathered 1.23 1 0 0.0 0.00 1.0e+00 NTN5
Pulse wave peak to peak time 1.41 1 0 0.0 0.00 1.0e+00 VEGFB
Medication: Blood pressure 1.90 2 0 0.0 0.00 1.0e+00 GIT1 OPRL1
Angina (self-reported) 6.73 7 2 4.4 0.99 4.5e-06 ABCG5 C19orf80 LPL OPRL1 PSRC1 SLC22A3 SPC24
Medication: Allopurinol 3.45 2 1 2.2 0.00 1.0e+00 FNDC4 PIGV
Heart disease (mother) 3.92 2 0 0.0 0.00 1.0e+00 ABO SLC22A3
Whole body fat mass 1.40 4 2 4.4 -0.66 2.3e-01 HMGCR PVRL2 SLC22A3 TXNL4B
Leg fat mass (right) 1.49 6 1 2.2 -0.51 3.1e-01 FNDC4 GIT1 HMGCR PVRL2 SLC22A3 TXNL4B
Arm predicted mass (right) 2.57 7 4 8.9 -0.87 2.1e-03 ABO FNDC4 HMGCR NTN5 PSRC1 SLC22A3 SMARCA4
Pulse rate, automated reading 2.72 5 1 2.2 0.08 8.9e-01 ABO APOB DOCK7 FNDC4 KANK2
Alcohol intake frequency. 3.46 3 2 4.4 0.00 1.0e+00 FNDC4 LPIN3 NTN5
Comparative height size at age 10 2.00 8 4 8.9 -0.82 4.0e-03 FNDC4 GIT1 KANK2 NTN5 PIGV PSRC1 SLC22A3 SPC24
Medication: Aspirin 6.40 8 1 2.2 0.98 1.6e-05 C19orf80 GIT1 LPL OPRL1 PSRC1 SLC22A3 SPC24 VEGFB
Hypertension (Self-reported) 2.54 6 5 11.1 0.67 1.5e-01 ABO GIT1 NTN5 OPRL1 PIGV VEGFB
Illnesses of father: Heart disease 6.31 7 2 4.4 0.98 2.1e-05 ABO LPL OPRL1 PSRC1 SLC22A3 SMARCA4 SPC24
Forced expiratory volume in 1-second (FEV1), predicted 1.47 1 0 0.0 0.00 1.0e+00 SMARCA4
Whole body fat-free mass 2.54 6 4 8.9 -0.86 6.0e-03 FNDC4 HMGCR PSRC1 SLC22A3 SMARCA4 SPC24
Leg fat-free mass (right) 2.26 6 3 6.7 -0.86 1.3e-02 FNDC4 HMGCR PSRC1 SLC22A3 SMARCA4 SPC24
Arm fat percentage (left) 1.41 5 2 4.4 0.02 9.8e-01 ABO GIT1 HMGCR PVRL2 TXNL4B
Diabetes diagnosed by doctor 2.80 2 1 2.2 0.00 1.0e+00 FNDC4 VEGFB
Medication for cholesterol 7.44 13 2 4.4 -0.97 1.0e-08 DOCK7 FNDC4 HMGCR NTN5 PAFAH1B2 PIGV PSRC1 PVRL2 RGL3 SLC22A3 SPC24 TXNL4B VEGFB
Back pain experienced in last month 1.56 1 0 0.0 0.00 1.0e+00 APOB
Asthma (self-reported) 1.06 1 0 0.0 0.00 1.0e+00 SMARCA4
Medication: Aspirin 6.32 8 1 2.2 0.98 1.5e-05 C19orf80 GIT1 LPL OPRL1 PSRC1 SLC22A3 SPC24 VEGFB
Forced expiratory volume in 1-second (FEV1), predicted percentage 1.31 3 0 0.0 0.00 1.0e+00 ABO OPRL1 PVRL2
Whole body water mass 2.54 6 4 8.9 -0.86 6.7e-03 FNDC4 HMGCR PSRC1 SLC22A3 SMARCA4 SPC24
Leg predicted mass (right) 2.26 6 3 6.7 -0.86 1.3e-02 FNDC4 HMGCR PSRC1 SLC22A3 SMARCA4 SPC24
Arm fat mass (left) 1.54 6 1 2.2 -0.59 1.6e-01 ABO FNDC4 HMGCR PVRL2 SLC22A3 TXNL4B
Number of self-reported non-cancer illnesses 3.99 5 1 2.2 1.00 2.0e-07 FNDC4 GIT1 NTN5 OPRL1 VEGFB
Guilty feelings 0.84 1 0 0.0 0.00 1.0e+00 LPIN3
Mother's age at death 1.27 1 0 0.0 0.00 1.0e+00 ABO
Medication: Blood pressure 2.60 3 1 2.2 0.00 1.0e+00 NTN5 PIGV VEGFB
High cholesterol (Self-reported) 45.81 30 27 60.0 0.98 5.4e-25 ABCA1 ABCG5 ABO APOB APOC2 C19orf80 CDKN2D COX8A DOCK7 FNDC4 HMGCR KANK2 LPIN3 LPL NAT2 NTN5 OPRL1 PAFAH1B2 PIGV PSRC1 PVRL2 RASA3 RGL3 SLC22A3 SMARCA4 SPC24 TOMM40 TXNL4B VEGFB ZNF259
Medication: Bendroflumethiazide 1.77 2 0 0.0 0.00 1.0e+00 NTN5 PIGV
Medication: Lisinopril 1.77 1 0 0.0 0.00 1.0e+00 RASA3
Medication: Atorvastatin 19.77 21 11 24.4 0.99 3.2e-19 ABCA1 ABO APOB C19orf80 CDKN2D DOCK7 FNDC4 HMGCR KANK2 LPL NTN5 OPRL1 PAFAH1B2 PSRC1 PVRL2 SLC22A3 SMARCA4 SPC24 TOMM40 TXNL4B ZNF259
Basal metabolic rate 2.37 5 4 8.9 -0.87 1.2e-02 FNDC4 HMGCR PSRC1 SLC22A3 SMARCA4
Leg fat percentage (left) 1.15 3 1 2.2 0.00 1.0e+00 GIT1 HMGCR KANK2
Arm fat-free mass (left) 2.50 7 4 8.9 -0.87 2.5e-03 ABO FNDC4 HMGCR NTN5 PSRC1 SLC22A3 SMARCA4
Number of operations (self-reported) 1.24 1 0 0.0 0.00 1.0e+00 ABCG5
Diastolic blood pressure, automated reading 1.75 3 1 2.2 0.00 1.0e+00 ABO C19orf80 PIGV
Myopia 1.40 1 0 0.0 0.00 1.0e+00 KANK2
Vascular/heart problems diagnosed by doctor 3.01 6 3 6.7 -0.70 1.2e-01 ABO GIT1 NTN5 OPRL1 PIGV VEGFB
Pain experienced in last month 1.38 1 0 0.0 0.00 1.0e+00 OPRL1
Heart attack/myocardial infarction (self-reported) 5.49 5 1 2.2 0.98 3.1e-03 C19orf80 LPL PSRC1 SLC22A3 SPC24
Deep venous thrombosis (DVT) (self-reported) 7.75 1 1 2.2 0.00 1.0e+00 ABO
Heart disease (siblings) 4.19 3 1 2.2 0.00 1.0e+00 PSRC1 SLC22A3 ZNF259
Impedance of whole body 1.70 4 3 6.7 1.00 3.0e-03 ABO FNDC4 HMGCR OPRL1
Leg fat mass (left) 1.44 4 1 2.2 -0.67 3.3e-01 FNDC4 HMGCR SLC22A3 TXNL4B
Arm predicted mass (left) 2.58 7 5 11.1 -0.88 1.8e-03 ABO FNDC4 HMGCR NTN5 PSRC1 SLC22A3 SMARCA4

Associations by panel

study tissue # hits % hits/tests avg chisq
GTEx Adipose Subcutaneous 1 0.029 1.5
GTEx Adipose Visceral Omentum 2 0.098 1.5
GTEx Adrenal Gland 0 0.000 1.5
GTEx Artery Aorta 3 0.101 1.5
GTEx Artery Coronary 0 0.000 1.5
GTEx Artery Tibial 4 0.106 1.5
GTEx Brain Caudate basal ganglia 1 0.109 1.3
GTEx Brain Cerebellar Hemisphere 2 0.134 1.5
GTEx Brain Cerebellum 1 0.050 1.5
GTEx Brain Cortex 0 0.000 1.5
GTEx Brain Frontal Cortex BA9 1 0.108 1.6
GTEx Brain Hippocampus 0 0.000 1.5
GTEx Brain Hypothalamus 0 0.000 1.4
GTEx Brain Nucleus accumbens basal ganglia 0 0.000 1.5
GTEx Brain Putamen basal ganglia 0 0.000 1.4
GTEx Breast Mammary Tissue 0 0.000 1.5
GTEx Breast Mammary Tissue (Male) 0 0.000 1.5
GTEx Breast Mammary Tissue (Female) 0 0.000 1.5
GTEx Cells EBV-transformed lymphocytes 0 0.000 1.5
GTEx Cells Transformed fibroblasts 6 0.143 1.4
GTEx Colon Sigmoid 1 0.068 1.4
GTEx Colon Transverse 0 0.000 1.5
GTEx Esophagus Gastroesophageal Junction 0 0.000 1.4
GTEx Esophagus Mucosa 6 0.181 1.5
GTEx Esophagus Muscularis 5 0.155 1.5
GTEx Heart Atrial Appendage 0 0.000 1.5
GTEx Heart Left Ventricle 0 0.000 1.4
GTEx Liver 2 0.279 1.8
GTEx Lung 0 0.000 1.5
GTEx Muscle Skeletal 1 0.035 1.5
GTEx Nerve Tibial 3 0.069 1.4
GTEx Ovary 0 0.000 1.5
GTEx Pancreas 1 0.061 1.4
GTEx Pituitary 0 0.000 1.5
GTEx Prostate 0 0.000 1.6
GTEx Skin Not Sun Exposed Suprapubic 3 0.122 1.5
GTEx Skin Sun Exposed Lower leg 6 0.165 1.6
GTEx Small Intestine Terminal Ileum 0 0.000 1.5
GTEx Spleen 2 0.142 1.6
GTEx Stomach 1 0.069 1.6
GTEx Testis 3 0.095 1.4
GTEx Thyroid 6 0.150 1.5
GTEx Uterus 0 0.000 1.4
GTEx Vagina 1 0.157 1.6
GTEx Whole Blood 4 0.201 1.6
METSIM Adipose 2 0.043 1.4
NTR Blood 3 0.125 1.5
ROSMAP Brain Pre-frontal Cortex 8 0.182 1.5
YFS Blood 6 0.130 1.4
CommonMind Brain Pre-frontal Cortex 9 0.167 1.6
The Cancer Genome Atlas Bladder Urothelial Carcinoma 0 0.000 1.4
The Cancer Genome Atlas Breast Invasive Carcinoma 4 0.091 1.4
The Cancer Genome Atlas Cervical Squamous Cell Carcinoma 2 0.182 1.5
The Cancer Genome Atlas Colon Adenocarcinoma 4 0.194 1.6
The Cancer Genome Atlas Esophageal Carcinoma 1 0.146 1.4
The Cancer Genome Atlas Glioblastoma Multiforme 2 0.196 1.5
The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma 2 0.073 1.5
The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma 8 0.195 1.5
The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma 4 0.195 1.6
The Cancer Genome Atlas Brain Lower Grade Glioma 6 0.139 1.5
The Cancer Genome Atlas Liver Hepatocellular Carcinoma 4 0.362 1.8
The Cancer Genome Atlas Lung Adenocarcinoma 4 0.136 1.5
The Cancer Genome Atlas Lung Squamous Cell Carcinoma 1 0.040 1.4
The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma 5 0.314 1.6
The Cancer Genome Atlas Pancreatic Adenocarcinoma 3 0.181 1.4
The Cancer Genome Atlas Pheochromocytoma and Paraganglioma 1 0.075 1.4
The Cancer Genome Atlas Prostate Adenocarcinoma 6 0.130 1.4
The Cancer Genome Atlas Rectum Adenocarcinoma 1 0.145 1.4
The Cancer Genome Atlas Soft Tissue Sarcoma 1 0.094 1.4
The Cancer Genome Atlas Skin Cutaneous Melanoma 0 0.000 1.6
The Cancer Genome Atlas Stomach Adenocarcinoma 3 0.178 1.5
The Cancer Genome Atlas Testicular Germ Cell Tumors 0 0.000 1.4
The Cancer Genome Atlas Thyroid Carcinoma 9 0.174 1.5
The Cancer Genome Atlas Uterine Corpus Endometrial Carcinoma 0 0.000 1.6