TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Pain experienced in last month
:
←
→
chr5:169,590,807-171,419,658
Best TWAS P=1.02e-07 · Best GWAS P=1.52e-06 conditioned to 0.285
169.5M
170M
170.5M
171M
171.5M
0
1
2
3
4
5
6
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
METSIM
Adipose
RANBP17
0.08
0.06
blup
710
0.06
1.5e-09
4.6
-5.3
1.0e-07
-0.88
0.05
0.93
TRUE
2
The Cancer Genome Atlas
Colon Adenocarcinoma
GABRP
0.09
0.01
blup
86
0.03
5.3e-03
-4.6
5.2
2.1e-07
0.41
0.01
0.59
TRUE