[Hub]/) : Traits : BMI : ← →

chr12:109,231,851-111,634,281

Best TWAS P=7.25e-11 · Best GWAS P=9.17e-11 conditioned to 0.00348

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	GTEx	Adipose Visceral Omentum	MMAB	0.10	-0.01	lasso	4	0.00	3.8e-01	-5.3	-5.7	1.2e-08	0.01	0.07	0.42	TRUE
2	GTEx	Artery Tibial	VPS29	0.05	0.03	lasso	3	0.02	5.9e-03	6.5	6.1	1.4e-09	0.98	0.02	0.92	FALSE
3	GTEx	Cells EBV-transformed lymphocytes	ARPC3	0.13	0.09	lasso	4	0.04	2.0e-02	6.3	-6.3	2.6e-10	-0.65	0.02	0.84	FALSE
4	GTEx	Cells Transformed fibroblasts	VPS29	0.09	0.13	lasso	3	0.13	9.8e-10	6.5	6.1	1.1e-09	0.99	0.01	0.99	FALSE
5	GTEx	Colon Sigmoid	KCTD10	0.25	0.16	lasso	8	0.15	6.2e-06	4.9	-5.5	3.0e-08	-0.01	0.09	0.89	FALSE
6	GTEx	Colon Transverse	VPS29	0.13	0.01	enet	41	0.10	2.0e-05	4.7	5.4	7.0e-08	0.58	0.05	0.48	FALSE
7	GTEx	Colon Transverse	MMAB	0.08	0.07	lasso	2	0.05	1.7e-03	4.9	-5.1	2.9e-07	-0.02	0.11	0.74	FALSE
8	GTEx	Esophagus Mucosa	VPS29	0.14	0.13	lasso	6	0.13	3.0e-09	4.9	5.5	2.9e-08	0.94	0.05	0.95	FALSE
9	GTEx	Esophagus Muscularis	IFT81	0.26	0.24	lasso	5	0.26	6.7e-16	4.7	5.3	9.2e-08	0.65	0.02	0.98	FALSE
10	GTEx	Lung	GPN3	0.08	0.08	enet	8	0.07	1.0e-05	4.8	-5.2	1.9e-07	-0.83	0.37	0.62	FALSE
11	GTEx	Muscle Skeletal	ARPC3	0.14	0.11	enet	23	0.10	2.2e-10	6.0	-6.3	3.8e-10	-0.75	0.03	0.97	FALSE
12	GTEx	Muscle Skeletal	VPS29	0.06	0.06	lasso	3	0.05	4.3e-06	6.5	6.2	6.9e-10	0.99	0.01	0.99	FALSE
13	GTEx	Muscle Skeletal	IFT81	0.08	0.08	lasso	5	0.07	1.7e-07	6.3	6.5	7.2e-11	0.67	0.02	0.98	TRUE
14	GTEx	Muscle Skeletal	ANAPC7	0.08	0.01	lasso	3	0.00	1.1e-01	4.8	6.0	2.4e-09	0.90	0.03	0.77	FALSE
15	GTEx	Nerve Tibial	VPS29	0.05	0.01	lasso	4	0.00	2.5e-01	5.4	5.4	7.6e-08	0.91	0.05	0.57	FALSE
16	GTEx	Skin Not Sun Exposed Suprapubic	VPS29	0.06	0.01	lasso	3	0.01	6.9e-02	6.3	6.5	8.8e-11	0.87	0.03	0.72	FALSE
17	GTEx	Skin Sun Exposed Lower leg	ARPC3	0.13	0.15	lasso	3	0.15	1.9e-12	6.1	-6.1	9.2e-10	-0.69	0.05	0.95	FALSE
18	GTEx	Spleen	VPS29	0.24	0.01	enet	14	0.04	2.9e-02	4.7	5.7	1.3e-08	0.75	0.03	0.67	FALSE
19	GTEx	Testis	ARPC3	0.16	0.16	lasso	3	0.14	7.5e-07	6.1	-6.1	9.0e-10	-0.69	0.04	0.96	FALSE
20	GTEx	Thyroid	VPS29	0.07	0.01	lasso	5	0.01	8.9e-02	5.4	5.4	5.4e-08	0.90	0.02	0.78	FALSE
21	NTR	Blood	GPN3	0.03	0.01	blup	236	0.02	2.7e-06	4.8	-5.8	6.5e-09	-0.81	0.04	0.96	FALSE
22	YFS	Blood	ARPC3	0.06	0.04	lasso	4	0.05	7.9e-16	5.5	-5.7	1.3e-08	-0.87	0.56	0.44	FALSE
23	YFS	Blood	GLTP	0.05	0.01	enet	14	0.04	1.5e-13	4.7	5.8	6.0e-09	0.60	0.01	0.99	FALSE
24	The Cancer Genome Atlas	Breast Invasive Carcinoma	VPS29	0.02	0.02	lasso	5	0.03	4.6e-06	5.4	6.0	2.7e-09	0.94	0.02	0.97	FALSE
25	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	ARPC3	0.03	0.01	blup	22	0.02	3.6e-03	6.1	-5.2	1.8e-07	-0.67	0.00	0.87	FALSE
26	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	MYO1H	0.22	0.16	lasso	5	0.15	4.1e-16	-5.2	5.2	2.3e-07	-0.08	0.00	0.99	FALSE
27	The Cancer Genome Atlas	Brain Lower Grade Glioma	RAD9B	0.04	0.02	blup	29	0.03	4.9e-04	6.0	6.0	1.9e-09	0.74	0.01	0.90	FALSE
28	The Cancer Genome Atlas	Brain Lower Grade Glioma	VPS29	0.06	0.06	enet	7	0.06	2.1e-07	5.4	6.0	1.5e-09	0.94	0.09	0.91	FALSE
29	The Cancer Genome Atlas	Lung Adenocarcinoma	RAD9B	0.04	0.03	lasso	5	0.01	7.0e-03	6.1	5.8	5.6e-09	0.61	0.02	0.98	FALSE
30	The Cancer Genome Atlas	Prostate Adenocarcinoma	KCTD10	0.30	0.20	enet	12	0.22	3.1e-22	-5.2	-5.4	6.4e-08	0.05	0.01	0.99	FALSE
31	The Cancer Genome Atlas	Thyroid Carcinoma	C12orf24	0.08	0.08	lasso	3	0.10	1.6e-09	5.5	-5.2	2.6e-07	-0.89	0.19	0.80	FALSE
32	The Cancer Genome Atlas	Thyroid Carcinoma	RAD9B	0.10	0.06	enet	5	0.06	1.2e-06	6.1	6.1	9.5e-10	0.69	0.02	0.98	FALSE