[Hub]/) : Traits : Height : ← →

chr3:70,309,725-73,817,526

Best TWAS P=1.04e-24 · Best GWAS P=3.63e-78 conditioned to 1.13e-55

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Cells Transformed fibroblasts PPP4R2 0.18 0.19 lasso 4 0.19 5.9e-14 -7.1 -7.1 9.6e-13 -0.03 0.01 0.99 FALSE
2 GTEx Muscle Skeletal PPP4R2 0.11 0.07 enet 8 0.11 1.6e-10 -7.1 -5.9 3.2e-09 -0.02 0.01 0.99 FALSE
3 GTEx Uterus FOXP1 0.56 0.08 lasso 6 0.07 1.7e-02 -2.0 -5.7 9.6e-09 0.01 0.08 0.27 TRUE
4 GTEx Whole Blood RYBP 0.13 0.18 lasso 1 0.17 1.1e-15 -7.8 -7.8 5.0e-15 0.54 1.00 0.00 FALSE
5 NTR Blood EBLN2 0.04 0.02 lasso 8 0.02 1.3e-08 -7.1 7.1 1.1e-12 0.06 0.01 0.99 FALSE
6 NTR Blood RYBP 0.05 0.03 lasso 5 0.04 5.4e-14 -8.8 -10.3 1.0e-24 0.58 1.00 0.00 TRUE
7 ROSMAP Brain Pre-frontal Cortex PPP4R2 0.16 0.10 lasso 8 0.12 1.2e-15 -7.1 -7.5 4.4e-14 -0.02 0.01 0.99 TRUE
8 YFS Blood RYBP 0.25 0.16 enet 33 0.23 7.8e-75 7.1 -10.0 1.2e-23 0.48 1.00 0.00 FALSE
9 The Cancer Genome Atlas Breast Invasive Carcinoma FLJ10213 0.01 0.01 lasso 1 0.01 5.4e-03 6.8 6.8 1.0e-11 0.04 0.01 0.97 FALSE
10 The Cancer Genome Atlas Brain Lower Grade Glioma FLJ10213 0.03 0.01 blup 37 0.02 2.8e-03 6.5 7.1 9.4e-13 0.03 0.02 0.68 FALSE
11 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma FLJ10213 0.05 0.06 lasso 2 0.05 3.8e-04 6.6 6.6 3.3e-11 0.04 0.05 0.55 FALSE
12 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma RYBP 0.10 0.00 blup 62 0.04 5.4e-04 -7.7 -9.5 2.4e-21 0.51 0.05 0.20 FALSE
13 The Cancer Genome Atlas Prostate Adenocarcinoma FLJ10213 0.03 0.02 blup 38 0.03 4.6e-04 -7.2 5.6 2.4e-08 0.04 0.01 0.98 FALSE