Best TWAS P=1.49e-09 · Best GWAS P=1.89e-08 conditioned to 0.0188
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Esophagus Muscularis | BCAS2 | 0.10 | 0.00 | enet | 21 | 0.00 | 0.5140 | 5.5 | -5.9 | 4.2e-09 | -0.67 | 0.03 | 0.78 | FALSE |
2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TRIM33 | 0.03 | 0.01 | blup | 56 | 0.02 | 0.0015 | 5.5 | -6.0 | 1.5e-09 | -0.63 | 0.02 | 0.81 | TRUE |