Best TWAS P=1.37e-07 · Best GWAS P=6.91e-07 conditioned to 0.0827
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Thyroid Carcinoma | SPG7 | 0.1 | 0.09 | lasso | 4 | 0.11 | 1.9e-10 | 4 | -5.3 | 1.4e-07 | 0.71 | 0.08 | 0.63 | TRUE |