Best TWAS P=3.76e-09 · Best GWAS P=2.84e-10 conditioned to 0.01
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FLNB | 0.04 | 0.03 | enet | 6 | 0.03 | 0.00030 | -5.6 | 5.7 | 1.2e-08 | -0.84 | 0.02 | 0.97 | FALSE |
2 | The Cancer Genome Atlas | Thyroid Carcinoma | DNASE1L3 | 0.05 | 0.02 | blup | 57 | 0.04 | 0.00021 | -6.3 | 5.9 | 3.8e-09 | -0.82 | 0.00 | 0.95 | TRUE |