Best TWAS P=9.84e-08 · Best GWAS P=2.91e-07 conditioned to 0.113
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | UBE2FP3 | 0.18 | 0.06 | lasso | 8 | 0.04 | 0.0017 | 4.8 | 5.2 | 2.6e-07 | 0.80 | 0.02 | 0.96 | TRUE |
2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CEPT1 | 0.03 | 0.03 | blup | 57 | 0.02 | 0.0022 | -4.3 | 5.3 | 9.8e-08 | 0.01 | 0.01 | 0.59 | TRUE |