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chr9:122,881,960-124,384,647

Best TWAS P=1.99e-13 · Best GWAS P=1.99e-13 conditioned to 1

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
2	GTEx	Artery Tibial	TRAF1	0.04	0.05	lasso	2	0.03	1.2e-03	-7.3	-7.3	2.0e-13	1.00	0.01	0.99	TRUE
13	The Cancer Genome Atlas	Prostate Adenocarcinoma	PHF19	0.03	0.03	lasso	2	0.02	3.6e-03	-7.3	7.3	2.6e-13	-0.96	0.01	0.92	FALSE
7	GTEx	Skin Sun Exposed Lower leg	TRAF1	0.11	0.09	lasso	5	0.09	1.4e-07	-7.3	-7.2	4.4e-13	0.97	0.01	0.99	FALSE
9	METSIM	Adipose	PHF19	0.07	0.01	bslmm	374	0.01	2.3e-02	-4.4	7.0	3.3e-12	-0.63	0.26	0.49	FALSE
5	GTEx	Esophagus Muscularis	PHF19	0.16	0.06	lasso	8	0.07	3.1e-05	-7.3	6.6	3.5e-11	-0.82	0.02	0.97	FALSE
6	GTEx	Skin Not Sun Exposed Suprapubic	TRAF1	0.25	0.17	lasso	12	0.16	4.4e-09	-7.3	-6.5	1.0e-10	0.97	0.01	0.99	FALSE
10	YFS	Blood	PHF19	0.05	0.03	enet	21	0.04	2.9e-14	-7.3	6.3	3.1e-10	-0.85	0.01	0.99	FALSE
1	GTEx	Adrenal Gland	PSMD5	0.40	0.22	enet	37	0.23	7.2e-09	-4.5	-6.2	7.0e-10	0.75	0.06	0.93	FALSE
3	GTEx	Brain Putamen basal ganglia	TRAF1	0.26	0.21	lasso	6	0.19	2.3e-05	-5.1	6.2	7.2e-10	-0.93	0.04	0.93	FALSE
4	GTEx	Esophagus Mucosa	TRAF1	0.08	0.00	lasso	4	0.01	8.5e-02	-7.3	-6.1	8.6e-10	0.66	0.02	0.95	FALSE
14	The Cancer Genome Atlas	Prostate Adenocarcinoma	TRAF1	0.07	0.06	blup	53	0.08	1.7e-08	-5.0	5.8	6.3e-09	-0.87	0.04	0.96	FALSE
12	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	TRAF1	0.05	0.00	blup	56	0.02	1.9e-02	-7.3	5.7	1.4e-08	-0.89	0.02	0.65	FALSE
8	GTEx	Skin Sun Exposed Lower leg	PSMD5	0.04	0.04	lasso	6	0.03	3.1e-03	-4.7	-5.5	2.8e-08	0.67	0.16	0.72	FALSE
11	The Cancer Genome Atlas	Breast Invasive Carcinoma	TRAF1	0.04	0.04	lasso	3	0.05	7.2e-10	-5.0	5.4	5.4e-08	-0.90	0.20	0.80	FALSE