[Hub]/) : Traits : Blood White Count : ← →

chr9:122,881,960-124,384,647

Best TWAS P=1.99e-13 · Best GWAS P=1.99e-13 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adrenal Gland PSMD5 0.40 0.22 enet 37 0.23 7.2e-09 -4.5 -6.2 7.0e-10 0.75 0.06 0.93 FALSE
2 GTEx Artery Tibial TRAF1 0.04 0.05 lasso 2 0.03 1.2e-03 -7.3 -7.3 2.0e-13 1.00 0.01 0.99 TRUE
3 GTEx Brain Putamen basal ganglia TRAF1 0.26 0.21 lasso 6 0.19 2.3e-05 -5.1 6.2 7.2e-10 -0.93 0.04 0.93 FALSE
4 GTEx Esophagus Mucosa TRAF1 0.08 0.00 lasso 4 0.01 8.5e-02 -7.3 -6.1 8.6e-10 0.66 0.02 0.95 FALSE
5 GTEx Esophagus Muscularis PHF19 0.16 0.06 lasso 8 0.07 3.1e-05 -7.3 6.6 3.5e-11 -0.82 0.02 0.97 FALSE
6 GTEx Skin Not Sun Exposed Suprapubic TRAF1 0.25 0.17 lasso 12 0.16 4.4e-09 -7.3 -6.5 1.0e-10 0.97 0.01 0.99 FALSE
7 GTEx Skin Sun Exposed Lower leg TRAF1 0.11 0.09 lasso 5 0.09 1.4e-07 -7.3 -7.2 4.4e-13 0.97 0.01 0.99 FALSE
8 GTEx Skin Sun Exposed Lower leg PSMD5 0.04 0.04 lasso 6 0.03 3.1e-03 -4.7 -5.5 2.8e-08 0.67 0.16 0.72 FALSE
9 METSIM Adipose PHF19 0.07 0.01 bslmm 374 0.01 2.3e-02 -4.4 7.0 3.3e-12 -0.63 0.26 0.49 FALSE
10 YFS Blood PHF19 0.05 0.03 enet 21 0.04 2.9e-14 -7.3 6.3 3.1e-10 -0.85 0.01 0.99 FALSE
11 The Cancer Genome Atlas Breast Invasive Carcinoma TRAF1 0.04 0.04 lasso 3 0.05 7.2e-10 -5.0 5.4 5.4e-08 -0.90 0.20 0.80 FALSE
12 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma TRAF1 0.05 0.00 blup 56 0.02 1.9e-02 -7.3 5.7 1.4e-08 -0.89 0.02 0.65 FALSE
13 The Cancer Genome Atlas Prostate Adenocarcinoma PHF19 0.03 0.03 lasso 2 0.02 3.6e-03 -7.3 7.3 2.6e-13 -0.96 0.01 0.92 FALSE
14 The Cancer Genome Atlas Prostate Adenocarcinoma TRAF1 0.07 0.06 blup 53 0.08 1.7e-08 -5.0 5.8 6.3e-09 -0.87 0.04 0.96 FALSE