TWAS
hub
About
Usage
Models
Genes
Traits
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Traits
:
Blood White Count
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chr14:80,730,147-82,308,044
Best TWAS P=1.82e-10 · Best GWAS P=3.46e-12 conditioned to 0.00527
80.8M
81M
81.2M
81.4M
81.6M
81.8M
82M
82.2M
82.4M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
TSHR
0.11
0.10
lasso
3
0.10
9.4e-12
6.5
-6.4
1.8e-10
-0.92
0.05
0.95
TRUE
2
The Cancer Genome Atlas
Brain Lower Grade Glioma
STON2
0.09
0.06
blup
92
0.07
2.8e-08
6.5
5.4
5.9e-08
0.79
0.03
0.97
FALSE