Best TWAS P=1.9e-10 · Best GWAS P=1.82e-10 conditioned to 0.00569
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Colon Transverse | FAM65C | 0.16 | 0.06 | lasso | 3 | 0.04 | 0.0057 | 5.4 | -6.4 | 1.9e-10 | -0.68 | 0.06 | 0.80 | TRUE |
| 2 | METSIM | Adipose | PARD6B | 0.03 | 0.00 | bslmm | 494 | 0.01 | 0.0509 | 5.8 | -5.1 | 2.8e-07 | -0.52 | 0.05 | 0.22 | FALSE |