[Hub]/) : Traits : Blood White Count :

chr20:61,561,153-62,912,463

Best TWAS P=9.9e-12 · Best GWAS P=3.21e-08 conditioned to 0.604

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex ARFRP1 0.07 0.07 lasso 3 0.06 5.3e-08 -5.3 5.2 1.5e-07 0.05 0.01 0.99 FALSE
2 CommonMind Brain Pre-frontal Cortex STMN3 0.07 0.02 lasso 4 0.05 2.8e-06 -4.3 -6.1 8.5e-10 -0.08 0.05 0.95 FALSE
3 GTEx Artery Coronary PCMTD2 0.23 0.11 enet 13 0.16 4.0e-06 -3.5 5.6 2.3e-08 0.30 0.17 0.56 TRUE
4 GTEx Brain Cerebellar Hemisphere STMN3 0.39 0.08 lasso 5 0.22 2.1e-06 -4.1 -5.2 1.6e-07 -0.02 0.17 0.56 FALSE
5 GTEx Brain Cerebellum STMN3 0.33 0.12 lasso 10 0.20 1.8e-06 -4.3 -5.5 4.0e-08 -0.04 0.07 0.90 FALSE
6 GTEx Cells Transformed fibroblasts CTD-3184A7.4 0.09 0.00 enet 28 0.00 1.4e-01 -5.5 -5.2 2.4e-07 0.00 0.02 0.85 FALSE
7 GTEx Whole Blood STMN3 0.10 0.00 lasso 3 0.00 1.2e-01 -3.9 6.8 9.9e-12 0.50 0.03 0.70 TRUE
8 YFS Blood LIME1 0.12 0.19 enet 15 0.19 5.3e-59 -5.3 -5.4 6.1e-08 -0.04 0.01 0.99 FALSE
9 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma RTEL1 0.05 0.04 blup 56 0.03 4.2e-03 -4.7 -6.3 3.0e-10 -0.05 0.01 0.79 FALSE
10 The Cancer Genome Atlas Prostate Adenocarcinoma ARFRP1 0.03 0.02 lasso 2 0.02 1.2e-03 -5.3 5.3 1.1e-07 0.05 0.01 0.96 FALSE
11 The Cancer Genome Atlas Prostate Adenocarcinoma LIME1 0.04 0.05 blup 47 0.05 9.0e-06 -5.4 -5.3 1.1e-07 -0.04 0.01 0.99 FALSE