[Hub]/) : Traits : Blood White Count : ← →

chr1:26,428,864-28,939,138

Best TWAS P=7.48e-15 · Best GWAS P=2.23e-14 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Cells Transformed fibroblasts PIGV 0.05 0.00 enet 10 0.03 4.3e-03 -4.8 5.3 9.1e-08 -0.03 0.71 0.01 FALSE
2 GTEx Esophagus Muscularis THEMIS2 0.10 0.02 lasso 4 0.03 7.1e-03 4.9 6.5 7.0e-11 -0.85 0.02 0.94 FALSE
3 GTEx Testis NUDC 0.10 0.01 enet 16 0.06 1.4e-03 3.1 -6.3 3.9e-10 0.03 0.06 0.10 TRUE
4 GTEx Whole Blood RPA2 0.16 0.10 enet 13 0.08 1.2e-07 -3.8 -5.3 1.3e-07 0.83 0.20 0.80 FALSE
5 METSIM Adipose THEMIS2 0.08 0.02 blup 210 0.04 1.8e-06 4.9 6.7 2.0e-11 -0.74 0.07 0.93 FALSE
6 NTR Blood C1orf38 0.08 0.06 enet 11 0.07 2.1e-21 4.9 6.6 4.0e-11 -0.79 0.99 0.01 FALSE
7 NTR Blood RPA2 0.09 0.09 lasso 4 0.09 9.0e-27 -7.5 7.5 6.8e-14 -0.99 0.01 0.99 FALSE
8 The Cancer Genome Atlas Breast Invasive Carcinoma C1orf38 0.05 0.03 lasso 5 0.04 4.5e-08 3.3 5.9 4.7e-09 -0.63 0.12 0.87 FALSE
9 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma C1orf38 0.03 0.01 blup 35 0.02 1.7e-03 -7.5 7.8 7.5e-15 -0.98 0.02 0.97 TRUE
10 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma C1orf38 0.04 0.02 blup 35 0.03 4.2e-04 4.9 5.4 6.9e-08 -0.74 0.06 0.43 FALSE
11 The Cancer Genome Atlas Brain Lower Grade Glioma RPA2 0.07 0.07 enet 8 0.07 4.2e-08 -4.5 -5.2 2.5e-07 0.78 0.35 0.65 FALSE
12 The Cancer Genome Atlas Lung Adenocarcinoma C1orf38 0.04 0.02 blup 35 0.03 1.0e-04 -7.5 6.9 7.0e-12 -0.87 0.02 0.96 FALSE
13 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma RPA2 0.11 0.03 blup 46 0.07 1.3e-03 -3.7 -6.2 6.1e-10 0.80 0.01 0.63 FALSE
14 The Cancer Genome Atlas Thyroid Carcinoma RPA2 0.16 0.15 lasso 3 0.15 2.1e-14 -4.8 -5.2 2.6e-07 0.74 0.99 0.01 FALSE