[Hub]/) : Traits : Blood White Count : ← →

chr4:69,713-1,797,852

Best TWAS P=1.75e-15 · Best GWAS P=2.4e-20 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
16	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	CPLX1	0.10	0.04	lasso	3	0.04	1.1e-05	9.1	-8.0	1.8e-15	-0.75	0.00	1.00	TRUE
14	YFS	Blood	MYL5	0.17	0.01	blup	358	0.06	1.4e-17	-1.5	-6.9	5.8e-12	-0.40	0.01	0.99	TRUE
4	GTEx	Liver	PCGF3	0.27	0.15	enet	10	0.17	1.5e-05	-4.3	6.0	2.1e-09	0.51	0.13	0.22	TRUE
12	GTEx	Whole Blood	RP11-440L14.1	0.17	0.05	lasso	6	0.14	2.6e-13	-5.0	-5.4	8.0e-08	-0.69	0.02	0.98	TRUE
15	The Cancer Genome Atlas	Glioblastoma Multiforme	PCGF3	0.11	0.00	blup	69	0.05	1.6e-02	6.7	5.3	1.3e-07	0.64	0.02	0.27	TRUE
2	GTEx	Brain Putamen basal ganglia	RNF212	0.23	0.07	lasso	19	0.05	2.6e-02	4.3	5.2	1.5e-07	0.14	0.14	0.05	TRUE
3	GTEx	Cells EBV-transformed lymphocytes	PCGF3	0.44	0.24	lasso	7	0.24	2.4e-08	-4.3	5.2	1.7e-07	0.52	0.67	0.19	TRUE
18	The Cancer Genome Atlas	Pheochromocytoma and Paraganglioma	PCGF3	0.18	0.04	blup	70	0.12	2.6e-05	-1.8	5.1	2.7e-07	0.39	0.34	0.19	TRUE
11	GTEx	Whole Blood	AC139887.4	0.14	0.06	lasso	6	0.11	4.3e-10	9.2	-7.1	1.3e-12	-0.85	0.00	1.00	FALSE
10	GTEx	Whole Blood	PCGF3	0.26	0.12	enet	18	0.23	6.5e-21	9.2	-6.4	1.2e-10	-0.81	0.00	1.00	FALSE
17	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	PCGF3	0.11	0.07	blup	69	0.06	2.7e-04	-4.3	6.3	2.6e-10	0.54	0.20	0.50	FALSE
13	ROSMAP	Brain Pre-frontal Cortex	RP11-440L14.1	0.04	0.00	bslmm	329	0.02	2.8e-03	-4.2	6.1	1.1e-09	0.48	0.10	0.38	FALSE
1	GTEx	Brain Cerebellar Hemisphere	RNF212	0.35	0.17	lasso	6	0.18	1.7e-05	4.4	5.5	3.7e-08	0.16	0.48	0.04	FALSE
19	The Cancer Genome Atlas	Thyroid Carcinoma	FGFRL1	0.34	0.05	enet	32	0.17	1.2e-16	3.5	5.5	3.7e-08	0.22	0.00	0.99	FALSE
6	GTEx	Skin Sun Exposed Lower leg	AC139887.4	0.48	0.26	enet	40	0.31	7.7e-26	-4.3	5.4	5.8e-08	0.35	1.00	0.00	FALSE
8	GTEx	Vagina	PCGF3	0.43	0.20	lasso	7	0.23	4.5e-06	-4.3	5.3	9.9e-08	0.42	0.16	0.22	FALSE
7	GTEx	Skin Sun Exposed Lower leg	RP11-440L14.1	0.54	0.32	enet	24	0.38	9.3e-33	-4.3	5.3	1.4e-07	0.39	1.00	0.00	FALSE
5	GTEx	Skin Sun Exposed Lower leg	PCGF3	0.60	0.36	enet	30	0.42	4.4e-37	-4.3	5.2	2.4e-07	0.36	1.00	0.00	FALSE
9	GTEx	Vagina	RP11-440L14.1	0.36	0.17	lasso	7	0.16	1.5e-04	3.7	5.2	2.4e-07	0.53	0.11	0.22	FALSE