[Hub]/) : Traits : Blood Platelet Count : ← →

chr13:49,321,044-50,855,108

Best TWAS P=2.23e-12 · Best GWAS P=1.15e-09 conditioned to 0.631

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous PHF11 0.06 0.00 enet 19 0.01 4.4e-02 -5.0 7.0 2.2e-12 0.43 0.05 0.36 TRUE
2 GTEx Colon Transverse SETDB2 0.15 0.02 lasso 7 0.05 3.0e-03 5.9 -5.2 1.9e-07 -0.77 0.02 0.93 FALSE
3 GTEx Muscle Skeletal PHF11 0.11 0.14 lasso 6 0.13 9.4e-13 -5.7 5.7 1.6e-08 0.93 0.06 0.94 FALSE
4 GTEx Skin Not Sun Exposed Suprapubic RCBTB1 0.17 0.03 lasso 8 0.02 1.9e-02 -5.1 5.5 4.8e-08 0.52 0.16 0.50 FALSE
5 METSIM Adipose PHF11 0.16 0.14 lasso 9 0.14 8.7e-20 -5.7 5.8 5.7e-09 0.93 0.06 0.94 FALSE
6 METSIM Adipose SETDB2 0.06 0.03 enet 17 0.05 5.1e-08 -4.9 -5.3 1.1e-07 -0.80 0.01 0.99 FALSE
7 NTR Blood PHF11 0.04 0.03 bslmm 406 0.04 3.1e-12 -5.2 5.6 2.5e-08 0.77 0.18 0.82 FALSE
8 NTR Blood RCBTB1 0.07 0.05 lasso 13 0.08 9.6e-24 -5.2 5.6 1.9e-08 0.69 0.20 0.80 FALSE
9 YFS Blood PHF11 0.16 0.16 lasso 19 0.16 5.0e-49 -5.2 5.3 1.0e-07 0.91 0.31 0.68 FALSE
10 YFS Blood RCBTB1 0.07 0.03 enet 36 0.09 5.7e-28 -2.6 5.2 2.4e-07 0.61 0.92 0.08 FALSE
11 YFS Blood SETDB2 0.12 0.13 enet 22 0.15 5.3e-46 5.8 -5.5 4.6e-08 -0.89 0.01 0.99 FALSE
12 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma CAB39L 0.09 0.02 blup 88 0.06 4.1e-04 -3.7 -5.4 6.9e-08 -0.66 0.02 0.62 FALSE
13 The Cancer Genome Atlas Liver Hepatocellular Carcinoma PHF11 0.13 0.13 blup 92 0.12 4.3e-06 -5.2 -6.5 1.0e-10 -0.86 0.06 0.94 TRUE
14 The Cancer Genome Atlas Pancreatic Adenocarcinoma CAB39L 0.12 0.12 lasso 3 0.11 2.3e-05 -5.5 -5.4 5.7e-08 -0.80 0.02 0.93 FALSE