[Hub]/) : Traits : Blood Platelet Count :

chr16:56,847,929-59,253,397

Best TWAS P=6.57e-11 · Best GWAS P=4.54e-08 conditioned to 0.751

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex CCDC102A 0.16 0.09 enet 27 0.11 2.9e-13 -5.5 6.5 6.6e-11 -0.80 0.00 1.00 TRUE
2 GTEx Brain Cerebellum SETD6 0.37 0.27 lasso 7 0.25 4.5e-08 -4.9 5.5 3.6e-08 -0.01 0.02 0.98 TRUE
3 GTEx Muscle Skeletal CCDC102A 0.10 0.08 enet 6 0.06 7.0e-07 -5.5 5.5 3.3e-08 -0.98 0.00 1.00 FALSE
4 YFS Blood SETD6 0.14 0.10 bslmm 457 0.13 1.1e-39 -4.9 5.3 1.0e-07 -0.04 0.02 0.98 FALSE
5 The Cancer Genome Atlas Brain Lower Grade Glioma CCDC102A 0.05 0.05 lasso 4 0.05 2.5e-06 -5.5 5.8 6.1e-09 -0.98 0.00 1.00 FALSE