TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood Platelet Count
:
←
→
chr17:75,465,815-76,864,175
Best TWAS P=1.36e-08 · Best GWAS P=4.77e-11 conditioned to 1.89e-11
75.4M
75.6M
75.8M
76M
76.2M
76.4M
76.6M
76.8M
0
2
4
6
8
10
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
TMC6
0.11
0.02
lasso
2
0.05
1.6e-06
-5.2
-5.7
1.4e-08
0.02
0.06
0.54
TRUE
1
GTEx
Liver
SYNGR2
0.35
0.03
enet
14
0.12
2.6e-04
-5.0
5.2
2.2e-07
0.03
0.09
0.06
FALSE