TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood Platelet Count
:
←
→
chr18:8,778,916-10,313,183
Best TWAS P=6.19e-14 · Best GWAS P=8.21e-29 conditioned to 1.41e-07
8.8M
9M
9.2M
9.4M
9.6M
9.8M
10M
10.2M
10.4M
0
5
10
15
20
25
30
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
RALBP1
0.11
0.01
blup
562
0.04
5.6e-06
-7.2
-7.5
6.2e-14
0.42
0.73
0.21
TRUE
2
NTR
Blood
PPP4R1
0.04
0.01
lasso
5
0.02
4.7e-08
-7.1
7.1
9.5e-13
-0.66
0.93
0.05
TRUE
3
YFS
Blood
RALBP1
0.24
0.22
lasso
7
0.29
1.5e-94
-3.8
-5.8
5.1e-09
0.41
1.00
0.00
FALSE