Best TWAS P=3.53e-08 · Best GWAS P=5.05e-38 conditioned to 7.68e-34
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Ovary | RP13-514E23.2 | 0.19 | 0.14 | lasso | 5 | 0.07 | 9.9e-03 | 4.6 | -5.5 | 3.5e-08 | 0.17 | 0.13 | 0.06 | TRUE |
| 2 | NTR | Blood | ARHGAP24 | 0.06 | 0.05 | lasso | 12 | 0.06 | 2.7e-17 | 4.6 | -5.2 | 1.9e-07 | 0.21 | 1.00 | 0.00 | FALSE |
| 3 | YFS | Blood | ARHGAP24 | 0.17 | 0.19 | lasso | 12 | 0.20 | 1.1e-61 | 4.7 | -5.5 | 4.3e-08 | 0.18 | 1.00 | 0.00 | FALSE |