Best TWAS P=1.27e-19 · Best GWAS P=3.4e-69 conditioned to 6.33e-54
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | YFS | Blood | LYSMD3 | 0.02 | 0.01 | bslmm | 368 | 0.01 | 0.00011 | 3.6 | 6.7 | 1.9e-11 | -0.19 | 0.67 | 0.01 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | GPR98 | 0.08 | 0.00 | blup | 313 | 0.02 | 0.00210 | -6.3 | -9.1 | 1.3e-19 | 0.33 | 0.16 | 0.06 | TRUE |