[Hub]/) : Traits : Hair Pigment : ← →

chr9:4,934,896-6,697,128

Best TWAS P=3.01e-11 · Best GWAS P=1.72e-15 conditioned to 0.00504

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex KIAA1432 0.04 0.00 blup 514 0.03 2.7e-04 -0.26 5.2 1.7e-07 0.37 0.07 0.07 FALSE
2 GTEx Colon Transverse RANBP6 0.09 0.03 enet 8 0.05 2.6e-03 -1.65 -5.1 2.7e-07 -0.40 0.11 0.29 FALSE
3 GTEx Skin Sun Exposed Lower leg KIAA1432 0.11 0.04 lasso 5 0.03 9.2e-04 5.72 5.7 1.5e-08 0.43 0.57 0.04 FALSE
4 GTEx Testis ERMP1 0.12 0.12 lasso 4 0.12 3.6e-06 5.49 -6.0 1.4e-09 -0.39 0.72 0.14 FALSE
5 GTEx Testis RP11-207C16.4 0.30 0.18 lasso 8 0.17 4.7e-08 5.73 6.0 1.7e-09 0.44 0.94 0.04 TRUE
6 GTEx Thyroid KIAA1432 0.08 0.04 enet 10 0.04 9.5e-04 6.03 5.8 5.7e-09 0.41 0.58 0.02 FALSE
7 ROSMAP Brain Pre-frontal Cortex KIAA1432 0.05 0.00 blup 502 0.02 7.5e-04 5.72 5.8 6.2e-09 0.45 0.09 0.26 FALSE
8 The Cancer Genome Atlas Breast Invasive Carcinoma ERMP1 0.05 0.02 blup 80 0.02 3.3e-04 6.88 -6.7 3.0e-11 -0.49 0.40 0.25 TRUE
9 The Cancer Genome Atlas Brain Lower Grade Glioma ERMP1 0.04 0.00 enet 10 0.02 2.4e-03 5.72 -5.8 6.1e-09 -0.33 0.29 0.05 FALSE
10 The Cancer Genome Atlas Pancreatic Adenocarcinoma RANBP6 0.24 0.05 blup 38 0.04 6.6e-03 4.76 5.6 2.8e-08 0.55 0.01 0.05 TRUE