Best TWAS P=1.38e-08 · Best GWAS P=1.05e-06 conditioned to 0.804
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NTR | Blood | OBFC2B | 0.01 | 0.00 | bslmm | 248 | 0.00 | 3.6e-02 | 4.3 | -5.7 | 1.4e-08 | -0.53 | 0.01 | 0.16 | TRUE |
| 2 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | OBFC2B | 0.07 | 0.00 | blup | 20 | 0.00 | 3.0e-01 | 4.8 | -5.6 | 2.0e-08 | -0.72 | 0.00 | 0.20 | FALSE |
| 3 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SILV | 0.04 | 0.03 | enet | 6 | 0.04 | 7.9e-05 | 4.8 | 5.3 | 1.2e-07 | 0.38 | 0.00 | 0.78 | TRUE |