TWAS
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Traits
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Traits
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Lung FEV1/FVC ratio
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chr15:66,662,107-68,492,262
Best TWAS P=1.75e-11 · Best GWAS P=2.26e-14 conditioned to 8.2e-05
67M
67.5M
68M
68.5M
0
5
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Thyroid
SMAD3
0.19
0.02
enet
3
0.03
2.3e-03
-7.5
6.7
1.8e-11
-0.64
0.01
0.89
TRUE
1
CommonMind
Brain Pre-frontal Cortex
IQCH
0.13
0.11
bslmm
597
0.10
5.9e-12
5.3
-5.3
1.1e-07
0.06
1.00
0.00
TRUE
3
The Cancer Genome Atlas
Thyroid Carcinoma
SMAD3
0.22
0.12
enet
12
0.11
5.2e-11
-6.6
6.3
2.9e-10
-0.73
0.03
0.97
FALSE