Best TWAS P=4.75e-41 · Best GWAS P=1.45e-42 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | IQGAP1 | 0.19 | 0.21 | lasso | 5 | 0.20 | 1.7e-24 | -9.2 | -9.8 | 9.0e-23 | 0.77 | 1.00 | 0.00 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | ZNF774 | 0.20 | 0.08 | lasso | 7 | 0.14 | 1.8e-16 | -12.1 | 11.5 | 1.3e-30 | -0.71 | 0.74 | 0.26 | FALSE |
3 | GTEx | Adipose Subcutaneous | GDPGP1 | 0.12 | 0.10 | lasso | 4 | 0.09 | 1.8e-07 | -7.2 | -7.6 | 3.9e-14 | 0.29 | 0.96 | 0.02 | FALSE |
4 | GTEx | Adipose Subcutaneous | CIB1 | 0.22 | 0.17 | lasso | 4 | 0.17 | 1.5e-13 | 6.6 | -6.0 | 2.0e-09 | 0.18 | 1.00 | 0.00 | FALSE |
5 | GTEx | Adipose Subcutaneous | ZNF774 | 0.10 | 0.01 | lasso | 6 | 0.02 | 1.3e-02 | -7.2 | -7.4 | 1.6e-13 | 0.52 | 0.61 | 0.11 | FALSE |
6 | GTEx | Adipose Subcutaneous | RP11-697E2.7 | 0.18 | 0.16 | lasso | 7 | 0.16 | 8.2e-13 | -7.2 | -7.4 | 1.5e-13 | 0.23 | 1.00 | 0.00 | FALSE |
7 | GTEx | Adipose Visceral Omentum | GDPGP1 | 0.20 | 0.02 | enet | 41 | 0.04 | 2.3e-03 | -7.2 | -5.4 | 8.6e-08 | 0.18 | 0.17 | 0.05 | TRUE |
8 | GTEx | Adipose Visceral Omentum | SEMA4B | 0.13 | 0.00 | enet | 13 | 0.05 | 1.7e-03 | -7.6 | -9.2 | 4.8e-20 | 0.41 | 0.14 | 0.20 | FALSE |
9 | GTEx | Adipose Visceral Omentum | CIB1 | 0.13 | 0.06 | enet | 10 | 0.10 | 7.8e-06 | 6.6 | -5.9 | 3.9e-09 | 0.16 | 0.45 | 0.05 | FALSE |
10 | GTEx | Adipose Visceral Omentum | RP11-697E2.7 | 0.20 | 0.10 | lasso | 4 | 0.14 | 1.2e-07 | -7.2 | -8.2 | 2.2e-16 | 0.23 | 0.91 | 0.02 | FALSE |
11 | GTEx | Artery Aorta | IQGAP1 | 0.44 | 0.51 | enet | 27 | 0.51 | 5.3e-32 | -7.2 | -8.4 | 3.1e-17 | 0.59 | 1.00 | 0.00 | FALSE |
12 | GTEx | Artery Aorta | GDPGP1 | 0.17 | 0.15 | lasso | 4 | 0.10 | 4.8e-06 | -7.2 | -7.5 | 7.3e-14 | 0.24 | 0.92 | 0.04 | FALSE |
13 | GTEx | Artery Aorta | ZNF774 | 0.22 | 0.24 | enet | 16 | 0.23 | 7.6e-13 | -12.1 | -11.3 | 2.2e-29 | 0.86 | 0.67 | 0.33 | FALSE |
14 | GTEx | Artery Aorta | RP11-697E2.7 | 0.44 | 0.07 | lasso | 12 | 0.14 | 2.5e-08 | -7.2 | -9.7 | 2.5e-22 | 0.39 | 0.58 | 0.31 | FALSE |
15 | GTEx | Artery Coronary | IQGAP1 | 0.33 | 0.42 | enet | 19 | 0.44 | 2.6e-16 | -7.2 | -7.7 | 1.6e-14 | 0.52 | 1.00 | 0.00 | FALSE |
16 | GTEx | Artery Tibial | RP11-697E2.7 | 0.46 | 0.11 | lasso | 12 | 0.07 | 6.4e-06 | -7.2 | -8.1 | 5.5e-16 | 0.28 | 1.00 | 0.00 | FALSE |
17 | GTEx | Brain Cerebellar Hemisphere | RP11-697E2.7 | 0.25 | 0.28 | lasso | 3 | 0.28 | 9.6e-08 | -6.8 | -6.4 | 1.3e-10 | 0.21 | 0.55 | 0.06 | FALSE |
18 | GTEx | Brain Cerebellum | GDPGP1 | 0.20 | 0.02 | lasso | 6 | 0.05 | 1.8e-02 | -6.3 | -5.5 | 3.9e-08 | 0.28 | 0.06 | 0.60 | FALSE |
19 | GTEx | Brain Cerebellum | RP11-697E2.7 | 0.24 | 0.22 | lasso | 2 | 0.21 | 7.6e-07 | -7.4 | -7.8 | 4.1e-15 | 0.20 | 0.71 | 0.09 | FALSE |
20 | GTEx | Breast Mammary Tissue | RP11-697E2.7 | 0.24 | 0.18 | lasso | 4 | 0.15 | 2.9e-08 | -7.2 | -7.0 | 1.9e-12 | 0.23 | 0.97 | 0.01 | FALSE |
21 | GTEx | Breast Mammary Tissue (Female) | RP11-697E2.7 | 0.21 | 0.09 | lasso | 3 | 0.05 | 1.0e-02 | -7.2 | -5.7 | 1.2e-08 | 0.22 | 0.10 | 0.24 | FALSE |
22 | GTEx | Cells Transformed fibroblasts | IQGAP1 | 0.13 | 0.06 | enet | 19 | 0.11 | 9.2e-09 | -11.1 | -12.0 | 3.1e-33 | 0.75 | 0.03 | 0.95 | FALSE |
23 | GTEx | Cells Transformed fibroblasts | CIB1 | 0.13 | 0.10 | lasso | 3 | 0.09 | 2.9e-07 | -6.8 | 7.0 | 3.3e-12 | -0.21 | 1.00 | 0.00 | FALSE |
24 | GTEx | Colon Sigmoid | IQGAP1 | 0.18 | 0.16 | lasso | 7 | 0.15 | 6.6e-06 | -7.4 | -7.6 | 3.1e-14 | 0.52 | 0.91 | 0.04 | FALSE |
25 | GTEx | Colon Sigmoid | RP11-697E2.7 | 0.58 | 0.16 | lasso | 10 | 0.10 | 2.5e-04 | -7.2 | -7.6 | 3.2e-14 | 0.26 | 0.45 | 0.28 | FALSE |
26 | GTEx | Colon Transverse | IQGAP1 | 0.23 | 0.15 | lasso | 2 | 0.10 | 1.4e-05 | -7.2 | -6.8 | 7.9e-12 | 0.49 | 0.90 | 0.01 | FALSE |
27 | GTEx | Esophagus Gastroesophageal Junction | IQGAP1 | 0.11 | 0.15 | lasso | 3 | 0.14 | 7.9e-06 | -7.4 | -7.4 | 1.5e-13 | 0.52 | 0.60 | 0.18 | FALSE |
28 | GTEx | Esophagus Gastroesophageal Junction | ZNF774 | 0.16 | 0.16 | lasso | 2 | 0.11 | 7.8e-05 | -13.0 | -13.3 | 1.9e-40 | 0.95 | 0.03 | 0.94 | FALSE |
29 | GTEx | Esophagus Gastroesophageal Junction | RP11-697E2.7 | 0.34 | 0.11 | lasso | 7 | 0.07 | 1.3e-03 | -7.2 | -6.0 | 2.2e-09 | 0.15 | 0.16 | 0.08 | FALSE |
30 | GTEx | Esophagus Mucosa | IQGAP1 | 0.26 | 0.19 | enet | 39 | 0.21 | 2.3e-14 | -8.9 | -10.1 | 4.9e-24 | 0.68 | 0.86 | 0.14 | FALSE |
31 | GTEx | Esophagus Mucosa | CRTC3 | 0.08 | 0.07 | enet | 7 | 0.04 | 6.1e-04 | -12.3 | 12.4 | 3.8e-35 | -0.92 | 0.05 | 0.94 | FALSE |
32 | GTEx | Esophagus Mucosa | CIB1 | 0.19 | 0.23 | enet | 8 | 0.19 | 9.3e-13 | 6.6 | -6.7 | 1.6e-11 | 0.21 | 1.00 | 0.00 | FALSE |
33 | GTEx | Esophagus Mucosa | ZNF774 | 0.27 | 0.14 | enet | 24 | 0.22 | 1.3e-14 | -7.6 | 9.8 | 1.7e-22 | -0.58 | 1.00 | 0.00 | FALSE |
34 | GTEx | Esophagus Mucosa | RP11-697E2.7 | 0.11 | 0.12 | lasso | 3 | 0.10 | 2.7e-07 | -7.2 | -6.7 | 2.9e-11 | 0.24 | 0.89 | 0.01 | FALSE |
35 | GTEx | Esophagus Muscularis | IQGAP1 | 0.24 | 0.14 | enet | 18 | 0.14 | 5.7e-09 | -7.2 | -8.6 | 6.3e-18 | 0.63 | 0.95 | 0.05 | FALSE |
36 | GTEx | Esophagus Muscularis | ZNF774 | 0.18 | 0.19 | lasso | 5 | 0.18 | 4.1e-11 | -12.0 | 11.8 | 4.5e-32 | -0.87 | 0.74 | 0.26 | FALSE |
37 | GTEx | Esophagus Muscularis | RP11-697E2.7 | 0.32 | 0.04 | lasso | 4 | 0.13 | 4.4e-08 | -7.2 | -5.8 | 7.8e-09 | 0.26 | 0.23 | 0.37 | FALSE |
38 | GTEx | Heart Atrial Appendage | GDPGP1 | 0.15 | 0.09 | lasso | 4 | 0.06 | 1.5e-03 | -7.4 | -7.7 | 1.7e-14 | 0.18 | 0.35 | 0.09 | FALSE |
39 | GTEx | Heart Atrial Appendage | CIB1 | 0.22 | 0.14 | lasso | 4 | 0.11 | 1.2e-05 | 6.6 | -7.0 | 1.8e-12 | 0.21 | 0.44 | 0.04 | FALSE |
40 | GTEx | Lung | ZNF774 | 0.06 | 0.09 | enet | 6 | 0.03 | 1.5e-03 | -13.0 | -13.0 | 7.0e-39 | 0.89 | 0.10 | 0.87 | FALSE |
41 | GTEx | Lung | RP11-697E2.7 | 0.38 | 0.10 | lasso | 8 | 0.12 | 9.5e-10 | -7.4 | -7.6 | 2.9e-14 | 0.20 | 0.97 | 0.03 | FALSE |
42 | GTEx | Muscle Skeletal | SEMA4B | 0.10 | 0.04 | lasso | 8 | 0.05 | 8.6e-06 | -5.7 | -7.1 | 1.5e-12 | 0.18 | 0.95 | 0.01 | FALSE |
43 | GTEx | Muscle Skeletal | RP11-697E2.7 | 0.08 | 0.05 | lasso | 3 | 0.05 | 4.7e-06 | -7.2 | -6.8 | 8.1e-12 | 0.20 | 0.75 | 0.01 | FALSE |
44 | GTEx | Nerve Tibial | CRTC3 | 0.11 | 0.00 | lasso | 7 | 0.02 | 9.9e-03 | -7.3 | 8.2 | 3.3e-16 | -0.32 | 0.15 | 0.06 | FALSE |
45 | GTEx | Nerve Tibial | ZNF774 | 0.20 | 0.07 | enet | 37 | 0.14 | 7.6e-10 | -7.1 | -8.4 | 3.5e-17 | 0.65 | 0.22 | 0.78 | FALSE |
46 | GTEx | Nerve Tibial | RP11-697E2.7 | 0.27 | 0.11 | lasso | 9 | 0.09 | 1.1e-06 | -7.2 | -8.4 | 3.5e-17 | 0.36 | 0.59 | 0.38 | TRUE |
47 | GTEx | Ovary | IQGAP1 | 0.43 | 0.53 | lasso | 3 | 0.53 | 2.3e-15 | -7.2 | -7.2 | 4.1e-13 | 0.52 | 0.99 | 0.01 | FALSE |
48 | GTEx | Pancreas | RP11-697E2.7 | 0.32 | 0.17 | lasso | 6 | 0.13 | 3.6e-06 | -7.2 | -7.0 | 2.6e-12 | 0.23 | 0.63 | 0.03 | FALSE |
49 | GTEx | Pituitary | IQGAP1 | 0.60 | 0.45 | enet | 26 | 0.52 | 3.7e-15 | -7.2 | -9.1 | 6.6e-20 | 0.64 | 0.99 | 0.01 | FALSE |
50 | GTEx | Skin Not Sun Exposed Suprapubic | CIB1 | 0.20 | 0.26 | lasso | 2 | 0.25 | 8.5e-14 | 6.9 | -7.0 | 3.6e-12 | 0.21 | 1.00 | 0.00 | FALSE |
51 | GTEx | Skin Sun Exposed Lower leg | CRTC3 | 0.10 | 0.08 | lasso | 3 | 0.05 | 7.5e-05 | -13.6 | 13.2 | 6.6e-40 | -0.98 | 0.01 | 0.99 | FALSE |
52 | GTEx | Skin Sun Exposed Lower leg | SEMA4B | 0.16 | 0.05 | lasso | 5 | 0.11 | 3.1e-09 | 3.8 | -6.5 | 6.7e-11 | 0.26 | 0.92 | 0.01 | FALSE |
53 | GTEx | Skin Sun Exposed Lower leg | CIB1 | 0.20 | 0.16 | enet | 15 | 0.18 | 1.1e-14 | 6.8 | -10.2 | 2.8e-24 | 0.51 | 1.00 | 0.00 | FALSE |
54 | GTEx | Skin Sun Exposed Lower leg | RP11-697E2.7 | 0.30 | 0.05 | enet | 24 | 0.03 | 1.7e-03 | -7.2 | -6.0 | 1.9e-09 | 0.25 | 0.76 | 0.01 | FALSE |
55 | GTEx | Small Intestine Terminal Ileum | IQGAP1 | 0.27 | 0.26 | lasso | 4 | 0.20 | 2.7e-05 | -7.3 | -7.3 | 2.6e-13 | 0.52 | 0.23 | 0.31 | FALSE |
56 | GTEx | Spleen | IQGAP1 | 0.45 | 0.34 | lasso | 7 | 0.41 | 9.1e-12 | -7.3 | -9.6 | 1.3e-21 | 0.63 | 0.84 | 0.15 | FALSE |
57 | GTEx | Spleen | SEMA4B | 0.30 | 0.03 | lasso | 9 | 0.03 | 5.7e-02 | -4.8 | -5.1 | 2.8e-07 | 0.14 | 0.10 | 0.08 | FALSE |
58 | GTEx | Spleen | CIB1 | 0.57 | 0.47 | lasso | 7 | 0.47 | 7.9e-14 | 6.6 | -7.2 | 7.2e-13 | 0.21 | 1.00 | 0.00 | FALSE |
59 | GTEx | Stomach | IQGAP1 | 0.21 | 0.14 | enet | 17 | 0.18 | 8.3e-09 | -8.9 | -11.2 | 3.2e-29 | 0.84 | 0.24 | 0.76 | FALSE |
60 | GTEx | Testis | IQGAP1 | 0.25 | 0.37 | lasso | 4 | 0.36 | 1.2e-16 | -7.4 | -7.4 | 1.8e-13 | 0.52 | 1.00 | 0.00 | FALSE |
61 | GTEx | Testis | ZNF774 | 0.13 | 0.09 | lasso | 4 | 0.08 | 1.5e-04 | -8.9 | 9.2 | 4.5e-20 | -0.76 | 0.23 | 0.47 | FALSE |
62 | GTEx | Thyroid | ZNF774 | 0.09 | 0.06 | enet | 9 | 0.05 | 6.0e-05 | -12.1 | -11.8 | 2.8e-32 | 0.78 | 0.24 | 0.38 | FALSE |
63 | GTEx | Thyroid | RP11-697E2.7 | 0.29 | 0.14 | lasso | 7 | 0.10 | 5.6e-08 | -7.2 | -8.1 | 3.9e-16 | 0.28 | 1.00 | 0.00 | FALSE |
64 | GTEx | Thyroid | RP11-617F23.1 | 0.11 | 0.01 | lasso | 4 | 0.04 | 1.0e-03 | -3.9 | -7.0 | 2.0e-12 | 0.45 | 0.25 | 0.21 | FALSE |
65 | GTEx | Uterus | IQGAP1 | 0.29 | 0.16 | lasso | 5 | 0.13 | 1.3e-03 | -7.2 | -7.3 | 3.9e-13 | 0.51 | 0.16 | 0.40 | FALSE |
66 | GTEx | Vagina | IQGAP1 | 0.32 | 0.11 | lasso | 6 | 0.17 | 1.3e-04 | -8.9 | -6.9 | 4.4e-12 | 0.65 | 0.13 | 0.45 | FALSE |
67 | METSIM | Adipose | CIB1 | 0.29 | 0.19 | lasso | 10 | 0.23 | 1.5e-33 | 6.6 | -5.5 | 3.4e-08 | 0.16 | 1.00 | 0.00 | FALSE |
68 | METSIM | Adipose | GDPGP1 | 0.11 | 0.07 | lasso | 6 | 0.09 | 1.0e-13 | -7.4 | -8.3 | 8.5e-17 | 0.23 | 1.00 | 0.00 | FALSE |
69 | METSIM | Adipose | IQGAP1 | 0.11 | 0.08 | enet | 32 | 0.12 | 3.9e-17 | -13.5 | -12.3 | 5.1e-35 | 0.88 | 0.02 | 0.98 | FALSE |
70 | NTR | Blood | IQGAP1 | 0.03 | 0.04 | enet | 10 | 0.04 | 1.5e-12 | -13.2 | -12.9 | 8.2e-38 | 0.94 | 0.01 | 0.99 | TRUE |
71 | YFS | Blood | CIB1 | 0.45 | 0.37 | lasso | 7 | 0.46 | 6.3e-174 | 6.9 | -5.3 | 1.1e-07 | 0.14 | 1.00 | 0.00 | FALSE |
72 | YFS | Blood | CRTC3 | 0.02 | 0.01 | blup | 503 | 0.01 | 4.2e-05 | -13.5 | 11.1 | 1.7e-28 | -0.84 | 0.02 | 0.98 | FALSE |
73 | YFS | Blood | IQGAP1 | 0.18 | 0.17 | enet | 46 | 0.20 | 5.8e-65 | -9.1 | -11.4 | 4.1e-30 | 0.84 | 1.00 | 0.00 | FALSE |
74 | YFS | Blood | SEMA4B | 0.06 | 0.00 | blup | 432 | 0.03 | 8.7e-10 | -5.8 | 6.5 | 6.0e-11 | -0.10 | 0.99 | 0.00 | FALSE |
75 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | CIB1 | 0.07 | 0.04 | enet | 8 | 0.06 | 1.4e-05 | -7.1 | -8.1 | 8.6e-16 | 0.21 | 0.02 | 0.97 | FALSE |
76 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | IQGAP1 | 0.04 | 0.03 | lasso | 4 | 0.02 | 6.5e-03 | -13.2 | -13.3 | 2.8e-40 | 0.94 | 0.02 | 0.84 | FALSE |
77 | The Cancer Genome Atlas | Breast Invasive Carcinoma | C15orf58 | 0.08 | 0.03 | lasso | 5 | 0.04 | 1.4e-08 | -6.8 | -7.1 | 1.4e-12 | 0.18 | 0.04 | 0.96 | FALSE |
78 | The Cancer Genome Atlas | Breast Invasive Carcinoma | CIB1 | 0.03 | 0.03 | blup | 58 | 0.02 | 6.9e-06 | 7.7 | 8.2 | 3.3e-16 | -0.28 | 0.00 | 1.00 | FALSE |
79 | The Cancer Genome Atlas | Breast Invasive Carcinoma | IQGAP1 | 0.03 | 0.02 | blup | 94 | 0.02 | 6.5e-05 | -8.9 | -10.6 | 4.9e-26 | 0.80 | 0.09 | 0.89 | FALSE |
80 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | IQGAP1 | 0.15 | 0.09 | lasso | 4 | 0.12 | 1.9e-06 | -13.6 | -12.5 | 4.3e-36 | 0.92 | 0.01 | 0.99 | FALSE |
81 | The Cancer Genome Atlas | Colon Adenocarcinoma | CRTC3 | 0.07 | 0.02 | blup | 78 | 0.03 | 9.9e-03 | -8.5 | 5.9 | 3.8e-09 | -0.37 | 0.04 | 0.13 | FALSE |
82 | The Cancer Genome Atlas | Colon Adenocarcinoma | TTLL13 | 0.14 | 0.07 | enet | 17 | 0.12 | 1.8e-07 | -7.4 | -6.2 | 7.9e-10 | 0.15 | 0.02 | 0.98 | FALSE |
83 | The Cancer Genome Atlas | Glioblastoma Multiforme | IQGAP1 | 0.10 | -0.01 | blup | 95 | 0.02 | 1.0e-01 | -7.2 | -11.1 | 8.0e-29 | 0.76 | 0.04 | 0.54 | FALSE |
84 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | IQGAP1 | 0.15 | 0.05 | enet | 10 | 0.08 | 2.5e-09 | -9.2 | -9.3 | 2.0e-20 | 0.78 | 0.11 | 0.89 | FALSE |
85 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | ZNF774 | 0.04 | 0.02 | blup | 57 | 0.02 | 1.2e-03 | -7.7 | 11.5 | 8.1e-31 | -0.75 | 0.04 | 0.77 | FALSE |
86 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C15orf58 | 0.10 | 0.07 | lasso | 2 | 0.07 | 3.6e-08 | -6.8 | -6.0 | 1.7e-09 | 0.19 | 0.26 | 0.74 | FALSE |
87 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | IQGAP1 | 0.07 | 0.06 | blup | 94 | 0.07 | 9.5e-09 | -13.7 | -12.2 | 1.7e-34 | 0.85 | 0.00 | 1.00 | FALSE |
88 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | TTLL13 | 0.19 | 0.18 | blup | 62 | 0.19 | 5.6e-21 | -7.4 | -5.6 | 2.1e-08 | 0.13 | 0.03 | 0.97 | FALSE |
89 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ZNF774 | 0.04 | 0.00 | enet | 7 | 0.01 | 5.1e-02 | -13.0 | -10.9 | 1.2e-27 | 0.79 | 0.00 | 0.92 | FALSE |
90 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | C15orf58 | 0.07 | 0.01 | blup | 57 | 0.01 | 5.7e-02 | -6.8 | -7.8 | 4.9e-15 | 0.24 | 0.02 | 0.49 | FALSE |
91 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | IQGAP1 | 0.06 | 0.05 | blup | 94 | 0.04 | 2.6e-03 | -8.5 | -11.4 | 4.4e-30 | 0.79 | 0.07 | 0.74 | FALSE |
92 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | TTLL13 | 0.24 | 0.27 | lasso | 6 | 0.28 | 4.0e-16 | -7.4 | -7.5 | 7.0e-14 | 0.18 | 0.02 | 0.98 | TRUE |
93 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C15orf58 | 0.16 | 0.21 | lasso | 5 | 0.22 | 1.6e-24 | -6.8 | -7.7 | 1.0e-14 | 0.21 | 0.51 | 0.49 | TRUE |
94 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CIB1 | 0.07 | 0.05 | enet | 14 | 0.06 | 5.8e-07 | 6.9 | -5.5 | 4.0e-08 | 0.13 | 0.44 | 0.55 | FALSE |
95 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CRTC3 | 0.03 | 0.01 | blup | 78 | 0.01 | 4.2e-02 | -7.7 | 10.7 | 6.8e-27 | -0.75 | 0.02 | 0.65 | FALSE |
96 | The Cancer Genome Atlas | Brain Lower Grade Glioma | IQGAP1 | 0.05 | 0.04 | enet | 12 | 0.03 | 1.1e-04 | -7.2 | -6.0 | 2.6e-09 | 0.41 | 0.69 | 0.02 | FALSE |
97 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ZNF774 | 0.06 | 0.06 | lasso | 3 | 0.04 | 1.2e-05 | -13.0 | 12.9 | 2.5e-38 | -0.93 | 0.00 | 1.00 | FALSE |
98 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | C15orf58 | 0.10 | 0.03 | lasso | 4 | 0.07 | 3.5e-04 | 3.8 | -7.4 | 1.5e-13 | 0.27 | 0.01 | 0.89 | FALSE |
99 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | TTLL13 | 0.24 | 0.23 | lasso | 6 | 0.22 | 1.1e-10 | -7.4 | -7.4 | 1.2e-13 | 0.18 | 0.02 | 0.98 | FALSE |
100 | The Cancer Genome Atlas | Lung Adenocarcinoma | CIB1 | 0.03 | 0.02 | lasso | 3 | 0.02 | 1.9e-03 | 6.6 | -5.4 | 7.3e-08 | 0.14 | 0.10 | 0.21 | FALSE |
101 | The Cancer Genome Atlas | Lung Adenocarcinoma | IQGAP1 | 0.06 | 0.04 | blup | 94 | 0.03 | 5.8e-05 | -12.1 | -12.5 | 4.8e-36 | 0.90 | 0.12 | 0.87 | FALSE |
102 | The Cancer Genome Atlas | Lung Adenocarcinoma | TTLL13 | 0.05 | 0.08 | lasso | 7 | 0.07 | 4.4e-09 | -7.4 | -7.3 | 2.0e-13 | 0.17 | 0.03 | 0.97 | FALSE |
103 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | IQGAP1 | 0.02 | 0.02 | blup | 94 | 0.02 | 6.2e-03 | -9.1 | -9.5 | 2.7e-21 | 0.74 | 0.09 | 0.25 | FALSE |
104 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | TTLL13 | 0.06 | 0.00 | blup | 62 | 0.01 | 7.6e-03 | -4.2 | -6.2 | 4.2e-10 | 0.20 | 0.03 | 0.58 | FALSE |
105 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | ZNF774 | 0.04 | 0.03 | enet | 4 | 0.02 | 2.7e-03 | -7.6 | 8.5 | 2.5e-17 | -0.46 | 0.11 | 0.04 | FALSE |
106 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | C15orf58 | 0.06 | 0.04 | lasso | 1 | 0.03 | 7.3e-03 | -7.2 | -7.2 | 5.9e-13 | 0.23 | 0.03 | 0.48 | FALSE |
107 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | TTLL13 | 0.11 | 0.03 | blup | 62 | 0.06 | 7.3e-05 | -7.4 | -5.2 | 1.6e-07 | 0.18 | 0.03 | 0.94 | FALSE |
108 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | IQGAP1 | 0.40 | 0.06 | enet | 13 | 0.07 | 9.0e-04 | -12.0 | -10.1 | 6.7e-24 | 0.72 | 0.04 | 0.86 | FALSE |
109 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | C15orf58 | 0.15 | 0.10 | lasso | 7 | 0.12 | 1.8e-05 | -7.4 | -8.9 | 4.0e-19 | 0.27 | 0.01 | 0.91 | FALSE |
110 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | NGRN | 0.11 | 0.01 | blup | 52 | 0.06 | 2.4e-03 | -5.1 | 9.0 | 2.9e-19 | -0.29 | 0.02 | 0.55 | FALSE |
111 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C15orf58 | 0.10 | 0.05 | lasso | 4 | 0.06 | 5.8e-07 | -6.8 | -6.1 | 1.1e-09 | 0.18 | 0.04 | 0.96 | FALSE |
112 | The Cancer Genome Atlas | Prostate Adenocarcinoma | IQGAP1 | 0.11 | 0.03 | enet | 8 | 0.06 | 1.4e-06 | -9.2 | -10.1 | 4.7e-24 | 0.77 | 0.05 | 0.95 | FALSE |
113 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ZNF774 | 0.17 | 0.14 | blup | 57 | 0.14 | 9.2e-15 | -7.6 | 7.7 | 1.7e-14 | -0.38 | 1.00 | 0.00 | FALSE |
114 | The Cancer Genome Atlas | Stomach Adenocarcinoma | C15orf58 | 0.04 | 0.05 | lasso | 1 | 0.03 | 2.4e-03 | -7.4 | -7.4 | 1.4e-13 | 0.17 | 0.02 | 0.94 | FALSE |
115 | The Cancer Genome Atlas | Stomach Adenocarcinoma | IQGAP1 | 0.12 | 0.07 | lasso | 4 | 0.07 | 1.4e-05 | -13.5 | -13.4 | 4.7e-41 | 0.95 | 0.02 | 0.98 | TRUE |
116 | The Cancer Genome Atlas | Stomach Adenocarcinoma | TTLL13 | 0.07 | 0.08 | lasso | 3 | 0.07 | 1.5e-05 | -7.4 | -6.2 | 7.9e-10 | 0.16 | 0.02 | 0.98 | FALSE |
117 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | IQGAP1 | 0.14 | 0.07 | lasso | 2 | 0.08 | 8.5e-04 | -11.3 | -11.5 | 9.4e-31 | 0.72 | 0.04 | 0.72 | FALSE |
118 | The Cancer Genome Atlas | Thyroid Carcinoma | C15orf58 | 0.11 | 0.06 | blup | 57 | 0.10 | 1.3e-09 | -7.4 | -7.0 | 2.4e-12 | 0.21 | 0.02 | 0.98 | FALSE |
119 | The Cancer Genome Atlas | Thyroid Carcinoma | IQGAP1 | 0.06 | 0.04 | blup | 95 | 0.08 | 3.0e-08 | -8.9 | -11.2 | 4.2e-29 | 0.82 | 0.02 | 0.98 | FALSE |
120 | The Cancer Genome Atlas | Thyroid Carcinoma | TTLL13 | 0.13 | 0.14 | lasso | 6 | 0.16 | 2.3e-15 | -7.1 | -6.0 | 2.1e-09 | 0.13 | 0.11 | 0.89 | FALSE |