TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Hypothyroidism (self reported)
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chr1:23,431,777-24,861,704
Best TWAS P=5.27e-08 · Best GWAS P=3.29e-07 conditioned to 0.0558
23.4M
23.6M
23.8M
24M
24.2M
24.4M
24.6M
24.8M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Brain Cortex
HMGCL
0.22
0.09
enet
12
0.12
3.2e-04
4.5
5.4
5.3e-08
0.68
0.03
0.82
TRUE
2
The Cancer Genome Atlas
Testicular Germ Cell Tumors
FUCA1
0.20
0.15
blup
35
0.14
1.5e-05
4.6
5.3
1.2e-07
0.46
0.00
0.95
FALSE