Best TWAS P=3.03e-16 · Best GWAS P=9.85e-19 conditioned to 9.19e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NTR | Blood | CD44 | 0.03 | 0 | blup | 684 | 0.01 | 0.00087 | 7.1 | -5.3 | 9.6e-08 | -0.46 | 0.06 | 0.40 | FALSE |
| 2 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SLC1A2 | 0.03 | 0 | blup | 180 | 0.01 | 0.05320 | 7.0 | -8.2 | 3.0e-16 | -0.69 | 0.03 | 0.49 | TRUE |