TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood Red Count
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chr21:44,251,223-45,879,403
Best TWAS P=1.44e-08 · Best GWAS P=2.11e-07 conditioned to 0.148
44.2M
44.4M
44.6M
44.8M
45M
45.2M
45.4M
45.6M
45.8M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Esophagus Mucosa
PDXK
0.29
0.18
enet
12
0.24
4.1e-16
-4.9
-5.7
1.4e-08
0.75
0.04
0.96
TRUE
3
GTEx
Muscle Skeletal
HSF2BP
0.10
0.04
lasso
7
0.04
1.5e-04
-4.8
-5.5
3.9e-08
0.86
0.05
0.94
FALSE
1
GTEx
Esophagus Mucosa
RRP1B
0.14
0.10
enet
13
0.11
8.0e-08
-4.6
-5.2
1.8e-07
0.86
0.05
0.95
FALSE
4
The Cancer Genome Atlas
Ovarian Serous Cystadenocarcinoma
RRP1B
0.04
0.01
lasso
4
0.03
7.1e-03
-4.8
5.2
2.0e-07
-0.88
0.02
0.69
FALSE