Best TWAS P=1.86e-09 · Best GWAS P=8.61e-13 conditioned to 7.92e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Brain Nucleus accumbens basal ganglia | C2orf47 | 0.25 | 0.01 | lasso | 3 | 0.00 | 2.8e-01 | 6.8 | -6.0 | 1.9e-09 | -0.89 | 0.03 | 0.71 | TRUE |
| 2 | YFS | Blood | SPATS2L | 0.06 | 0.00 | bslmm | 547 | 0.04 | 1.7e-14 | 6.7 | -5.5 | 3.7e-08 | -0.57 | 0.04 | 0.96 | FALSE |