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chr12:27,234,999-28,643,213

Best TWAS P=3.3e-11 · Best GWAS P=7.67e-11 conditioned to 0.087

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
9	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	LOC100133893	0.06	0.04	blup	33	0.04	1.0e-02	4.3	6.6	3.3e-11	0.84	0.02	0.64	TRUE
2	GTEx	Artery Tibial	RP11-860B13.1	0.09	0.10	lasso	2	0.10	4.8e-08	6.4	6.4	1.2e-10	1.00	0.00	1.00	FALSE
1	GTEx	Artery Tibial	KLHL42	0.18	0.16	lasso	2	0.14	4.5e-11	6.4	6.4	1.5e-10	1.00	0.00	1.00	FALSE
11	The Cancer Genome Atlas	Stomach Adenocarcinoma	LOC100133893	0.08	0.09	lasso	2	0.08	2.8e-06	6.4	6.2	6.0e-10	0.99	0.01	0.99	FALSE
8	The Cancer Genome Atlas	Ovarian Serous Cystadenocarcinoma	LOC100133893	0.04	0.01	blup	33	0.03	2.1e-03	6.4	6.0	1.6e-09	0.86	0.01	0.81	FALSE
4	The Cancer Genome Atlas	Colon Adenocarcinoma	LOC100133893	0.07	0.03	blup	33	0.07	7.1e-05	6.3	5.9	3.0e-09	0.85	0.02	0.95	FALSE
3	The Cancer Genome Atlas	Breast Invasive Carcinoma	LOC100133893	0.04	0.08	blup	33	0.10	3.6e-19	4.3	5.9	3.1e-09	0.81	0.36	0.64	FALSE
5	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	LOC100133893	0.07	0.10	blup	33	0.11	1.2e-12	5.4	5.7	1.3e-08	0.86	0.04	0.96	FALSE
10	The Cancer Genome Atlas	Stomach Adenocarcinoma	KLHDC5	0.06	0.04	blup	55	0.02	6.3e-03	6.3	-5.5	3.0e-08	-0.86	0.01	0.97	FALSE
6	The Cancer Genome Atlas	Lung Adenocarcinoma	LOC100133893	0.09	0.19	lasso	7	0.18	2.8e-20	5.4	5.5	3.6e-08	0.82	0.63	0.37	FALSE
7	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	LOC100133893	0.03	0.03	blup	33	0.03	5.4e-04	6.5	5.4	6.4e-08	0.92	0.01	0.99	FALSE
12	The Cancer Genome Atlas	Thyroid Carcinoma	LOC100133893	0.06	0.06	lasso	4	0.06	2.1e-06	5.4	5.4	7.8e-08	0.75	0.26	0.73	FALSE