[Hub]/) : Traits : Comparative height size at age 10 : ← →

chr9:97,520,168-101,477,500

Best TWAS P=1.84e-16 · Best GWAS P=3.78e-34 conditioned to 1.1e-30

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	LOC441454	0.05	0.01	lasso	3	0.02	1.5e-03	5.9	5.8	6.8e-09	0.07	0.04	0.55	FALSE
2	GTEx	Adipose Subcutaneous	HSD17B3	0.21	0.01	enet	31	0.04	1.9e-04	6.4	5.8	5.7e-09	0.05	0.32	0.20	FALSE
3	GTEx	Adipose Visceral Omentum	C9orf156	0.19	0.15	lasso	4	0.11	1.6e-06	-5.3	-5.5	4.5e-08	0.05	0.45	0.51	FALSE
4	GTEx	Artery Tibial	RP11-435O5.5	0.09	0.04	lasso	2	0.02	7.3e-03	8.2	-8.0	9.6e-16	-0.03	0.24	0.09	TRUE
5	GTEx	Brain Cerebellar Hemisphere	C9orf156	0.26	0.22	lasso	2	0.14	1.9e-04	-5.3	-5.3	1.1e-07	0.05	0.13	0.51	FALSE
6	GTEx	Brain Cerebellum	C9orf156	0.30	0.27	lasso	7	0.24	8.1e-08	-4.9	-5.2	2.1e-07	0.04	0.54	0.40	FALSE
7	GTEx	Brain Cortex	C9orf156	0.51	0.32	enet	11	0.29	8.1e-09	-5.3	-6.0	2.5e-09	0.05	0.50	0.47	FALSE
8	GTEx	Brain Frontal Cortex BA9	C9orf156	0.15	0.28	lasso	1	0.26	1.1e-07	-5.3	-5.3	1.1e-07	0.05	0.33	0.39	FALSE
9	GTEx	Breast Mammary Tissue	CDC14B	0.16	0.02	enet	21	0.02	3.7e-02	8.0	-7.0	2.0e-12	-0.06	0.06	0.86	FALSE
10	GTEx	Breast Mammary Tissue	ERCC6L2	0.17	0.02	lasso	4	0.03	1.2e-02	2.5	5.6	2.3e-08	-0.14	0.28	0.04	TRUE
11	GTEx	Breast Mammary Tissue (Male)	C9orf156	0.13	-0.01	enet	1	-0.01	5.6e-01	-5.3	-5.3	1.1e-07	0.05	0.05	0.07	FALSE
12	GTEx	Breast Mammary Tissue (Female)	C9orf156	0.42	0.22	lasso	10	0.23	1.5e-07	-5.3	-6.7	1.8e-11	0.02	0.06	0.87	FALSE
13	GTEx	Cells EBV-transformed lymphocytes	AAED1	0.17	0.02	lasso	3	0.04	2.4e-02	7.8	7.3	3.9e-13	0.06	0.05	0.44	FALSE
14	GTEx	Cells Transformed fibroblasts	RP11-435O5.5	0.14	0.04	lasso	4	0.02	7.9e-03	5.1	-5.1	2.9e-07	0.07	0.36	0.03	FALSE
15	GTEx	Heart Left Ventricle	C9orf156	0.23	0.18	enet	13	0.16	9.3e-09	-5.3	-5.4	5.1e-08	0.05	0.55	0.45	FALSE
16	GTEx	Liver	PTCH1	0.25	0.06	enet	11	0.03	4.9e-02	6.3	5.2	2.0e-07	0.17	0.16	0.09	FALSE
17	GTEx	Nerve Tibial	HSD17B3	0.14	0.00	enet	20	0.00	2.4e-01	7.7	7.6	2.8e-14	0.11	0.09	0.34	FALSE
18	GTEx	Nerve Tibial	ZNF367	0.10	0.05	lasso	3	0.02	7.9e-03	8.1	7.7	1.1e-14	0.05	0.04	0.94	FALSE
19	GTEx	Ovary	C9orf156	0.39	0.23	enet	15	0.18	3.9e-05	-5.3	-6.5	8.5e-11	0.03	0.21	0.29	FALSE
20	GTEx	Stomach	C9orf156	0.18	0.19	lasso	1	0.18	5.9e-09	-5.3	-5.3	1.1e-07	0.05	0.54	0.44	FALSE
21	GTEx	Testis	HABP4	0.19	0.22	lasso	9	0.21	1.1e-09	7.9	7.9	3.3e-15	0.05	0.07	0.93	FALSE
22	GTEx	Testis	C9orf156	0.39	0.40	enet	14	0.41	1.1e-19	-5.3	-5.3	1.2e-07	0.06	0.52	0.48	FALSE
23	GTEx	Thyroid	CDC14B	0.15	0.10	lasso	5	0.08	5.3e-07	7.5	-7.4	1.7e-13	-0.09	0.20	0.80	FALSE
24	GTEx	Thyroid	C9orf156	0.21	0.26	lasso	1	0.26	7.9e-20	-5.3	-5.3	1.1e-07	0.05	0.46	0.54	FALSE
25	METSIM	Adipose	ANP32B	0.05	0.03	lasso	6	0.02	1.1e-03	-6.2	6.3	4.0e-10	0.04	0.00	0.99	FALSE
26	METSIM	Adipose	C9orf156	0.15	0.17	lasso	5	0.17	4.3e-25	-5.3	-5.3	1.0e-07	0.06	0.44	0.56	FALSE
27	METSIM	Adipose	ERCC6L2	0.06	0.01	bslmm	569	0.03	4.6e-05	6.9	-5.2	2.2e-07	0.20	0.16	0.11	TRUE
28	YFS	Blood	ANP32B	0.03	0.02	lasso	9	0.02	1.9e-08	-6.2	7.0	2.2e-12	0.05	0.00	1.00	TRUE
29	YFS	Blood	HABP4	0.08	0.09	enet	24	0.11	5.9e-34	8.2	-7.8	7.3e-15	-0.01	0.02	0.98	FALSE
30	The Cancer Genome Atlas	Breast Invasive Carcinoma	CDC14B	0.02	0.01	lasso	1	0.01	3.0e-03	8.0	-8.0	1.2e-15	-0.05	0.03	0.59	FALSE
31	The Cancer Genome Atlas	Glioblastoma Multiforme	CDC14B	0.16	0.17	blup	41	0.19	2.6e-06	7.8	-7.3	3.9e-13	-0.06	0.05	0.92	FALSE
32	The Cancer Genome Atlas	Glioblastoma Multiforme	HABP4	0.08	0.06	blup	44	0.05	1.6e-02	7.5	-8.2	1.8e-16	-0.04	0.03	0.49	TRUE
33	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	HABP4	0.02	0.02	blup	44	0.02	7.1e-03	7.8	8.1	6.2e-16	0.05	0.03	0.67	FALSE
34	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	CDC14B	0.03	0.02	blup	42	0.02	2.1e-03	7.8	-8.0	9.0e-16	-0.04	0.04	0.58	FALSE
35	The Cancer Genome Atlas	Brain Lower Grade Glioma	C9orf156	0.18	0.23	lasso	4	0.23	1.9e-25	-5.3	-5.4	5.5e-08	0.04	0.00	1.00	FALSE
36	The Cancer Genome Atlas	Brain Lower Grade Glioma	CDC14B	0.05	0.06	lasso	5	0.06	6.5e-07	7.7	-7.2	7.9e-13	-0.06	0.12	0.88	FALSE
37	The Cancer Genome Atlas	Brain Lower Grade Glioma	HABP4	0.05	0.08	lasso	5	0.08	6.9e-09	7.6	-7.7	1.4e-14	-0.06	0.11	0.89	FALSE
38	The Cancer Genome Atlas	Lung Squamous Cell Carcinoma	C9orf156	0.07	0.03	lasso	2	0.03	2.1e-04	-5.3	-5.2	1.6e-07	0.04	0.00	0.99	FALSE
39	The Cancer Genome Atlas	Prostate Adenocarcinoma	PTCH1	0.02	0.01	blup	54	0.02	1.1e-03	7.4	-7.1	1.0e-12	0.07	0.06	0.04	FALSE
40	The Cancer Genome Atlas	Stomach Adenocarcinoma	CDC14B	0.08	0.02	blup	41	0.04	1.0e-03	5.9	-8.1	6.6e-16	0.00	0.02	0.60	FALSE
41	The Cancer Genome Atlas	Thyroid Carcinoma	CDC14B	0.05	0.07	blup	42	0.08	4.8e-08	8.1	-7.9	3.2e-15	-0.04	0.05	0.95	FALSE