[Hub]/) : Traits : Comparative height size at age 10 :

chr1:40,522,971-42,542,658

Best TWAS P=8.28e-55 · Best GWAS P=2.55e-44 conditioned to 0.0344

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Artery Aorta CTPS1 0.10 0.00 enet 8 0.00 4.6e-01 9.78 10.8 5.1e-27 0.75 0.05 0.60 FALSE
2 GTEx Artery Coronary CTPS1 0.25 -0.01 enet 23 0.00 3.0e-01 0.45 7.3 2.7e-13 0.38 0.07 0.13 FALSE
3 GTEx Brain Cerebellum FOXO6 0.35 0.33 enet 21 0.36 1.2e-11 3.87 7.1 1.5e-12 -0.02 1.00 0.00 FALSE
4 GTEx Breast Mammary Tissue (Female) CTPS1 0.12 -0.01 lasso 4 -0.01 7.5e-01 11.25 10.5 9.2e-26 0.61 0.04 0.10 FALSE
5 GTEx Cells EBV-transformed lymphocytes CTPS1 0.26 0.11 lasso 6 0.08 1.6e-03 11.23 10.8 4.9e-27 0.70 0.19 0.35 FALSE
6 GTEx Colon Transverse SCMH1 0.16 0.07 enet 21 0.06 1.3e-03 0.99 -7.0 3.5e-12 -0.22 0.22 0.09 FALSE
7 GTEx Lung CTPS1 0.06 0.04 lasso 3 0.04 2.4e-04 11.26 12.6 1.7e-36 0.77 0.22 0.62 FALSE
8 GTEx Nerve Tibial SCMH1 0.16 0.03 enet 24 0.07 1.6e-05 13.31 -13.1 1.8e-39 -0.70 0.04 0.95 FALSE
9 GTEx Testis SLFNL1 0.30 0.17 lasso 14 0.28 5.3e-13 13.51 10.2 1.6e-24 0.86 0.01 0.99 FALSE
10 GTEx Testis CTPS1 0.57 0.28 enet 17 0.38 1.0e-17 -6.17 9.2 4.9e-20 0.48 0.97 0.03 FALSE
11 METSIM Adipose CTPS1 0.11 0.09 enet 31 0.09 6.2e-14 -6.17 8.0 1.2e-15 0.27 1.00 0.00 FALSE
12 ROSMAP Brain Pre-frontal Cortex CTPS1 0.04 0.04 enet 7 0.04 9.1e-06 11.27 8.6 7.6e-18 0.59 0.59 0.17 TRUE
13 The Cancer Genome Atlas Breast Invasive Carcinoma SLFNL1 0.03 0.01 enet 6 0.02 5.6e-05 -0.70 7.3 3.8e-13 0.58 0.10 0.75 FALSE
14 The Cancer Genome Atlas Brain Lower Grade Glioma COL9A2 0.03 0.04 lasso 2 0.03 6.5e-04 -5.37 5.4 7.7e-08 -0.07 0.00 0.98 TRUE
15 The Cancer Genome Atlas Brain Lower Grade Glioma CTPS 0.05 0.04 blup 49 0.03 1.0e-04 -6.17 7.0 3.3e-12 0.33 0.13 0.07 FALSE
16 The Cancer Genome Atlas Brain Lower Grade Glioma SCMH1 0.04 0.01 enet 7 0.02 2.5e-03 -0.12 -9.7 2.4e-22 -0.70 0.01 0.84 FALSE
17 The Cancer Genome Atlas Prostate Adenocarcinoma SCMH1 0.03 0.03 lasso 2 0.02 6.2e-03 13.95 -13.9 3.3e-44 -0.99 0.01 0.96 FALSE
18 The Cancer Genome Atlas Testicular Germ Cell Tumors SCMH1 0.35 0.14 blup 96 0.14 1.5e-05 -7.04 8.9 4.8e-19 0.47 0.18 0.25 FALSE
19 The Cancer Genome Atlas Thyroid Carcinoma SCMH1 0.07 0.08 blup 97 0.07 2.5e-07 13.18 -15.6 8.3e-55 -0.74 0.29 0.71 TRUE