[Hub]/) : Traits : Comparative height size at age 10 : ← →

chr1:40,522,971-42,542,658

Best TWAS P=8.28e-55 · Best GWAS P=2.55e-44 conditioned to 0.0344

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
19	The Cancer Genome Atlas	Thyroid Carcinoma	SCMH1	0.07	0.08	blup	97	0.07	2.5e-07	13.18	-15.6	8.3e-55	-0.74	0.29	0.71	TRUE
12	ROSMAP	Brain Pre-frontal Cortex	CTPS1	0.04	0.04	enet	7	0.04	9.1e-06	11.27	8.6	7.6e-18	0.59	0.59	0.17	TRUE
14	The Cancer Genome Atlas	Brain Lower Grade Glioma	COL9A2	0.03	0.04	lasso	2	0.03	6.5e-04	-5.37	5.4	7.7e-08	-0.07	0.00	0.98	TRUE
17	The Cancer Genome Atlas	Prostate Adenocarcinoma	SCMH1	0.03	0.03	lasso	2	0.02	6.2e-03	13.95	-13.9	3.3e-44	-0.99	0.01	0.96	FALSE
8	GTEx	Nerve Tibial	SCMH1	0.16	0.03	enet	24	0.07	1.6e-05	13.31	-13.1	1.8e-39	-0.70	0.04	0.95	FALSE
7	GTEx	Lung	CTPS1	0.06	0.04	lasso	3	0.04	2.4e-04	11.26	12.6	1.7e-36	0.77	0.22	0.62	FALSE
5	GTEx	Cells EBV-transformed lymphocytes	CTPS1	0.26	0.11	lasso	6	0.08	1.6e-03	11.23	10.8	4.9e-27	0.70	0.19	0.35	FALSE
1	GTEx	Artery Aorta	CTPS1	0.10	0.00	enet	8	0.00	4.6e-01	9.78	10.8	5.1e-27	0.75	0.05	0.60	FALSE
4	GTEx	Breast Mammary Tissue (Female)	CTPS1	0.12	-0.01	lasso	4	-0.01	7.5e-01	11.25	10.5	9.2e-26	0.61	0.04	0.10	FALSE
9	GTEx	Testis	SLFNL1	0.30	0.17	lasso	14	0.28	5.3e-13	13.51	10.2	1.6e-24	0.86	0.01	0.99	FALSE
16	The Cancer Genome Atlas	Brain Lower Grade Glioma	SCMH1	0.04	0.01	enet	7	0.02	2.5e-03	-0.12	-9.7	2.4e-22	-0.70	0.01	0.84	FALSE
10	GTEx	Testis	CTPS1	0.57	0.28	enet	17	0.38	1.0e-17	-6.17	9.2	4.9e-20	0.48	0.97	0.03	FALSE
18	The Cancer Genome Atlas	Testicular Germ Cell Tumors	SCMH1	0.35	0.14	blup	96	0.14	1.5e-05	-7.04	8.9	4.8e-19	0.47	0.18	0.25	FALSE
11	METSIM	Adipose	CTPS1	0.11	0.09	enet	31	0.09	6.2e-14	-6.17	8.0	1.2e-15	0.27	1.00	0.00	FALSE
2	GTEx	Artery Coronary	CTPS1	0.25	-0.01	enet	23	0.00	3.0e-01	0.45	7.3	2.7e-13	0.38	0.07	0.13	FALSE
13	The Cancer Genome Atlas	Breast Invasive Carcinoma	SLFNL1	0.03	0.01	enet	6	0.02	5.6e-05	-0.70	7.3	3.8e-13	0.58	0.10	0.75	FALSE
3	GTEx	Brain Cerebellum	FOXO6	0.35	0.33	enet	21	0.36	1.2e-11	3.87	7.1	1.5e-12	-0.02	1.00	0.00	FALSE
15	The Cancer Genome Atlas	Brain Lower Grade Glioma	CTPS	0.05	0.04	blup	49	0.03	1.0e-04	-6.17	7.0	3.3e-12	0.33	0.13	0.07	FALSE
6	GTEx	Colon Transverse	SCMH1	0.16	0.07	enet	21	0.06	1.3e-03	0.99	-7.0	3.5e-12	-0.22	0.22	0.09	FALSE