Best TWAS P=9.72e-08 · Best GWAS P=2.27e-07 conditioned to 0.00903
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MMAB | 0.03 | 0.01 | blup | 57 | 0.02 | 6.5e-06 | 4.6 | -5.2 | 1.7e-07 | -0.65 | 0.02 | 0.80 | FALSE |
| 2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MMAB | 0.04 | 0.02 | blup | 53 | 0.02 | 5.2e-03 | 4.6 | -5.3 | 1.3e-07 | -0.67 | 0.00 | 0.57 | FALSE |
| 3 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | MVK | 0.06 | 0.02 | enet | 5 | 0.06 | 2.1e-04 | 4.9 | -5.3 | 9.7e-08 | -0.57 | 0.00 | 0.68 | TRUE |