Best TWAS P=1.58e-07 · Best GWAS P=8.51e-08 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | ARHGAP42 | 0.24 | 0.24 | lasso | 4 | 0.24 | 2.4e-18 | -4.9 | -5.2 | 1.6e-07 | 0.97 | 0.00 | 1.00 | TRUE |
2 | GTEx | Artery Tibial | TMEM133 | 0.26 | 0.25 | enet | 28 | 0.27 | 1.3e-21 | -4.9 | -5.2 | 2.0e-07 | 0.91 | 0.01 | 0.99 | FALSE |