Best TWAS P=1.45e-29 · Best GWAS P=3.25e-36 conditioned to NaN
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | ATOH7 | 0.10 | 0.08 | lasso | 10 | 0.09 | 4.3e-11 | -9.4 | 8.7 | 3.0e-18 | 0.55 | 1.00 | 0.00 | FALSE |
| 2 | CommonMind | Brain Pre-frontal Cortex | DNA2 | 0.29 | 0.24 | lasso | 9 | 0.29 | 2.5e-35 | -8.7 | 7.3 | 4.0e-13 | 0.23 | 1.00 | 0.00 | FALSE |
| 3 | CommonMind | Brain Pre-frontal Cortex | PBLD | 0.07 | 0.09 | lasso | 3 | 0.08 | 4.8e-10 | -8.8 | -8.8 | 8.8e-19 | -0.38 | 1.00 | 0.00 | FALSE |
| 4 | CommonMind | Brain Pre-frontal Cortex | STOX1 | 0.14 | 0.08 | enet | 25 | 0.15 | 3.2e-18 | -4.9 | -8.0 | 1.0e-15 | -0.05 | 1.00 | 0.00 | TRUE |
| 5 | GTEx | Adipose Subcutaneous | PBLD | 0.14 | 0.12 | lasso | 3 | 0.09 | 3.8e-08 | -8.8 | -8.8 | 1.2e-18 | -0.38 | 1.00 | 0.00 | FALSE |
| 6 | GTEx | Adipose Subcutaneous | DNA2 | 0.31 | 0.23 | enet | 10 | 0.25 | 2.3e-20 | -8.7 | 8.7 | 4.2e-18 | 0.31 | 1.00 | 0.00 | FALSE |
| 7 | GTEx | Adipose Visceral Omentum | DNA2 | 0.32 | 0.18 | lasso | 9 | 0.20 | 1.9e-10 | -8.0 | 8.8 | 1.7e-18 | 0.29 | 1.00 | 0.00 | FALSE |
| 8 | GTEx | Adrenal Gland | DNA2 | 0.16 | 0.12 | lasso | 6 | 0.10 | 2.2e-04 | -8.7 | 8.9 | 4.7e-19 | 0.30 | 0.46 | 0.12 | FALSE |
| 9 | GTEx | Adrenal Gland | STOX1 | 0.47 | 0.46 | lasso | 4 | 0.46 | 3.1e-18 | -5.1 | -5.6 | 2.7e-08 | -0.11 | 1.00 | 0.00 | FALSE |
| 10 | GTEx | Artery Aorta | PBLD | 0.14 | 0.10 | lasso | 8 | 0.06 | 3.1e-04 | -8.8 | -9.1 | 6.4e-20 | -0.43 | 0.98 | 0.01 | FALSE |
| 11 | GTEx | Artery Aorta | DNA2 | 0.22 | 0.17 | lasso | 6 | 0.16 | 5.1e-09 | -8.7 | 8.8 | 9.6e-19 | 0.29 | 1.00 | 0.00 | FALSE |
| 12 | GTEx | Artery Aorta | STOX1 | 0.18 | 0.14 | enet | 13 | 0.10 | 3.6e-06 | -4.9 | -6.0 | 1.5e-09 | 0.04 | 1.00 | 0.00 | FALSE |
| 13 | GTEx | Artery Coronary | DNA2 | 0.12 | 0.12 | lasso | 5 | 0.12 | 5.3e-05 | -8.2 | 8.7 | 3.6e-18 | 0.32 | 0.27 | 0.29 | FALSE |
| 14 | GTEx | Artery Tibial | PBLD | 0.06 | 0.09 | lasso | 2 | 0.07 | 2.5e-06 | -8.8 | -8.8 | 2.1e-18 | -0.38 | 0.91 | 0.02 | FALSE |
| 15 | GTEx | Artery Tibial | DNA2 | 0.10 | 0.09 | lasso | 3 | 0.11 | 4.4e-09 | -8.2 | 8.7 | 3.2e-18 | 0.29 | 0.99 | 0.00 | FALSE |
| 16 | GTEx | Brain Caudate basal ganglia | PBLD | 0.17 | 0.14 | lasso | 16 | 0.13 | 1.2e-04 | -8.8 | -10.0 | 1.7e-23 | -0.48 | 0.61 | 0.07 | FALSE |
| 17 | GTEx | Brain Cerebellar Hemisphere | SLC25A16 | 0.30 | 0.16 | lasso | 3 | 0.08 | 4.0e-03 | -8.7 | -8.8 | 8.9e-19 | -0.28 | 0.59 | 0.02 | FALSE |
| 18 | GTEx | Brain Cerebellar Hemisphere | DNA2 | 0.28 | 0.29 | lasso | 11 | 0.27 | 1.4e-07 | -8.7 | 8.9 | 6.8e-19 | 0.29 | 0.71 | 0.04 | FALSE |
| 19 | GTEx | Brain Cerebellar Hemisphere | STOX1 | 0.45 | 0.28 | lasso | 9 | 0.27 | 1.2e-07 | -4.9 | -6.4 | 1.3e-10 | 0.02 | 0.89 | 0.01 | FALSE |
| 20 | GTEx | Brain Cerebellum | SLC25A16 | 0.22 | 0.15 | lasso | 9 | 0.19 | 2.2e-06 | -8.7 | -9.0 | 1.9e-19 | -0.28 | 0.31 | 0.09 | FALSE |
| 21 | GTEx | Brain Cerebellum | DNA2 | 0.45 | 0.47 | lasso | 3 | 0.47 | 1.0e-15 | -8.7 | 9.0 | 2.6e-19 | 0.30 | 1.00 | 0.00 | FALSE |
| 22 | GTEx | Brain Cerebellum | STOX1 | 0.22 | 0.04 | lasso | 11 | 0.06 | 6.4e-03 | -5.0 | -7.5 | 6.0e-14 | -0.02 | 0.22 | 0.23 | FALSE |
| 23 | GTEx | Brain Frontal Cortex BA9 | PBLD | 0.15 | 0.00 | lasso | 3 | 0.01 | 1.6e-01 | -8.8 | -9.4 | 7.7e-21 | -0.43 | 0.28 | 0.18 | FALSE |
| 24 | GTEx | Brain Hippocampus | PBLD | 0.19 | 0.01 | enet | 21 | 0.07 | 1.1e-02 | -8.8 | -6.4 | 1.7e-10 | -0.21 | 0.10 | 0.07 | FALSE |
| 25 | GTEx | Brain Hypothalamus | SLC25A16 | 0.20 | 0.19 | lasso | 5 | 0.14 | 3.6e-04 | -8.0 | -9.0 | 2.7e-19 | -0.35 | 0.11 | 0.32 | FALSE |
| 26 | GTEx | Brain Nucleus accumbens basal ganglia | PBLD | 0.20 | 0.13 | lasso | 2 | 0.09 | 1.7e-03 | -8.8 | -8.8 | 2.1e-18 | -0.38 | 0.12 | 0.50 | FALSE |
| 27 | GTEx | Brain Putamen basal ganglia | DNA2 | 0.34 | 0.31 | lasso | 5 | 0.25 | 1.4e-06 | -8.6 | 8.7 | 2.8e-18 | 0.26 | 0.78 | 0.01 | FALSE |
| 28 | GTEx | Breast Mammary Tissue | DNA2 | 0.30 | 0.26 | lasso | 7 | 0.26 | 8.2e-14 | -8.6 | 8.8 | 1.3e-18 | 0.28 | 1.00 | 0.00 | FALSE |
| 29 | GTEx | Breast Mammary Tissue | HERC4 | 0.07 | 0.00 | lasso | 3 | 0.02 | 3.6e-02 | -8.4 | -8.4 | 5.5e-17 | -0.32 | 0.13 | 0.04 | FALSE |
| 30 | GTEx | Breast Mammary Tissue (Male) | DNA2 | 0.32 | 0.14 | lasso | 5 | 0.07 | 1.2e-02 | -8.6 | 8.8 | 1.8e-18 | 0.29 | 0.34 | 0.05 | FALSE |
| 31 | GTEx | Breast Mammary Tissue (Female) | DNA2 | 0.15 | 0.10 | lasso | 3 | 0.07 | 3.6e-03 | -8.6 | 8.7 | 3.0e-18 | 0.29 | 0.19 | 0.05 | FALSE |
| 32 | GTEx | Cells EBV-transformed lymphocytes | DNA2 | 0.32 | 0.14 | lasso | 2 | 0.10 | 2.9e-04 | -8.0 | 8.1 | 6.3e-16 | 0.30 | 0.46 | 0.03 | FALSE |
| 33 | GTEx | Cells EBV-transformed lymphocytes | STOX1 | 0.37 | 0.35 | lasso | 7 | 0.38 | 3.4e-13 | -5.0 | -5.3 | 1.1e-07 | 0.08 | 1.00 | 0.00 | FALSE |
| 34 | GTEx | Cells Transformed fibroblasts | PBLD | 0.11 | 0.03 | enet | 15 | 0.04 | 6.4e-04 | -8.8 | -6.2 | 5.9e-10 | -0.21 | 0.26 | 0.03 | FALSE |
| 35 | GTEx | Cells Transformed fibroblasts | SLC25A16 | 0.10 | 0.02 | enet | 25 | 0.01 | 2.5e-02 | -8.1 | -6.6 | 4.1e-11 | -0.09 | 0.86 | 0.00 | FALSE |
| 36 | GTEx | Cells Transformed fibroblasts | DNA2 | 0.16 | 0.09 | lasso | 8 | 0.14 | 7.6e-11 | -8.1 | 9.2 | 5.1e-20 | 0.30 | 1.00 | 0.00 | FALSE |
| 37 | GTEx | Cells Transformed fibroblasts | RUFY2 | 0.12 | 0.14 | enet | 20 | 0.14 | 2.1e-10 | -8.1 | -8.4 | 4.3e-17 | -0.29 | 1.00 | 0.00 | FALSE |
| 38 | GTEx | Colon Sigmoid | STOX1 | 0.21 | 0.12 | lasso | 7 | 0.10 | 1.8e-04 | -7.8 | -7.8 | 4.0e-15 | 0.01 | 0.70 | 0.02 | FALSE |
| 39 | GTEx | Colon Transverse | DNA2 | 0.20 | 0.17 | lasso | 4 | 0.14 | 2.5e-07 | -8.2 | 8.2 | 1.6e-16 | 0.29 | 0.99 | 0.00 | FALSE |
| 40 | GTEx | Colon Transverse | STOX1 | 0.17 | 0.18 | enet | 22 | 0.20 | 5.6e-10 | -4.9 | -7.1 | 1.3e-12 | 0.01 | 1.00 | 0.00 | FALSE |
| 41 | GTEx | Esophagus Gastroesophageal Junction | DNA2 | 0.21 | 0.16 | enet | 28 | 0.14 | 9.4e-06 | -8.7 | 6.0 | 2.1e-09 | 0.32 | 0.35 | 0.07 | FALSE |
| 42 | GTEx | Esophagus Mucosa | SLC25A16 | 0.10 | 0.02 | enet | 15 | 0.04 | 1.3e-03 | -8.7 | -6.7 | 2.1e-11 | -0.20 | 0.92 | 0.01 | FALSE |
| 43 | GTEx | Esophagus Mucosa | DNA2 | 0.32 | 0.12 | lasso | 4 | 0.17 | 2.1e-11 | -8.0 | 8.1 | 3.8e-16 | 0.29 | 1.00 | 0.00 | FALSE |
| 44 | GTEx | Esophagus Mucosa | STOX1 | 0.22 | 0.23 | lasso | 10 | 0.23 | 3.6e-15 | -5.0 | -5.8 | 5.2e-09 | 0.07 | 1.00 | 0.00 | FALSE |
| 45 | GTEx | Esophagus Muscularis | PBLD | 0.07 | 0.03 | lasso | 7 | 0.02 | 1.5e-02 | -8.8 | -9.2 | 5.7e-20 | -0.40 | 0.66 | 0.07 | FALSE |
| 46 | GTEx | Esophagus Muscularis | SLC25A16 | 0.10 | 0.07 | lasso | 4 | 0.06 | 1.7e-04 | -8.7 | -8.3 | 7.2e-17 | -0.26 | 0.76 | 0.01 | FALSE |
| 47 | GTEx | Esophagus Muscularis | DNA2 | 0.35 | 0.24 | enet | 10 | 0.33 | 9.3e-21 | -8.2 | 9.0 | 2.1e-19 | 0.29 | 1.00 | 0.00 | FALSE |
| 48 | GTEx | Esophagus Muscularis | STOX1 | 0.15 | 0.07 | lasso | 5 | 0.04 | 3.2e-03 | -6.4 | -7.7 | 1.9e-14 | -0.01 | 0.55 | 0.09 | FALSE |
| 49 | GTEx | Esophagus Muscularis | RUFY2 | 0.06 | 0.02 | lasso | 6 | 0.02 | 2.0e-02 | -8.5 | -9.9 | 5.6e-23 | -0.43 | 0.18 | 0.04 | FALSE |
| 50 | GTEx | Heart Atrial Appendage | PBLD | 0.08 | 0.02 | lasso | 2 | 0.02 | 6.1e-02 | -9.7 | -11.0 | 5.6e-28 | -0.46 | 0.06 | 0.53 | FALSE |
| 51 | GTEx | Heart Atrial Appendage | DNA2 | 0.28 | 0.15 | enet | 26 | 0.22 | 2.2e-10 | -8.0 | 7.6 | 2.4e-14 | 0.28 | 0.99 | 0.00 | FALSE |
| 52 | GTEx | Heart Left Ventricle | DNA2 | 0.10 | 0.12 | lasso | 6 | 0.11 | 3.0e-06 | -8.7 | 8.8 | 1.5e-18 | 0.28 | 0.91 | 0.02 | FALSE |
| 53 | GTEx | Liver | DNA2 | 0.26 | 0.15 | lasso | 7 | 0.19 | 6.5e-06 | -8.7 | 8.9 | 4.8e-19 | 0.26 | 0.29 | 0.09 | FALSE |
| 54 | GTEx | Liver | STOX1 | 0.19 | 0.24 | lasso | 3 | 0.16 | 3.9e-05 | -6.4 | -7.0 | 2.2e-12 | 0.03 | 0.70 | 0.02 | FALSE |
| 55 | GTEx | Lung | DNA2 | 0.22 | 0.17 | enet | 12 | 0.24 | 3.9e-18 | -8.2 | 8.7 | 4.6e-18 | 0.29 | 1.00 | 0.00 | FALSE |
| 56 | GTEx | Lung | STOX1 | 0.07 | 0.06 | lasso | 5 | 0.05 | 9.8e-05 | -4.9 | -5.4 | 5.2e-08 | 0.08 | 0.88 | 0.01 | FALSE |
| 57 | GTEx | Muscle Skeletal | PBLD | 0.11 | 0.10 | lasso | 12 | 0.12 | 5.1e-12 | -8.7 | -9.5 | 2.7e-21 | -0.47 | 1.00 | 0.00 | FALSE |
| 58 | GTEx | Muscle Skeletal | DNA2 | 0.18 | 0.16 | lasso | 4 | 0.19 | 1.7e-18 | -8.7 | 8.8 | 1.1e-18 | 0.29 | 1.00 | 0.00 | FALSE |
| 59 | GTEx | Muscle Skeletal | STOX1 | 0.17 | 0.21 | lasso | 11 | 0.22 | 1.6e-21 | -6.8 | -7.4 | 1.7e-13 | 0.02 | 1.00 | 0.00 | FALSE |
| 60 | GTEx | Muscle Skeletal | KIAA1279 | 0.36 | 0.39 | lasso | 3 | 0.39 | 1.0e-40 | 5.9 | -5.7 | 1.2e-08 | -0.13 | 1.00 | 0.00 | FALSE |
| 61 | GTEx | Muscle Skeletal | RUFY2 | 0.08 | 0.05 | enet | 10 | 0.03 | 2.5e-04 | -8.1 | -7.9 | 3.3e-15 | -0.28 | 0.88 | 0.03 | FALSE |
| 62 | GTEx | Nerve Tibial | DNA2 | 0.37 | 0.31 | enet | 14 | 0.31 | 4.6e-22 | -8.7 | 9.0 | 2.0e-19 | 0.29 | 1.00 | 0.00 | TRUE |
| 63 | GTEx | Nerve Tibial | STOX1 | 0.16 | 0.11 | lasso | 6 | 0.11 | 3.6e-08 | -6.4 | -6.7 | 2.4e-11 | 0.01 | 0.99 | 0.00 | FALSE |
| 64 | GTEx | Ovary | DNA2 | 0.15 | 0.12 | lasso | 3 | 0.06 | 1.7e-02 | -8.1 | 8.6 | 6.8e-18 | 0.32 | 0.12 | 0.09 | FALSE |
| 65 | GTEx | Pancreas | PBLD | 0.18 | 0.17 | enet | 6 | 0.16 | 3.1e-07 | -8.8 | -7.9 | 2.2e-15 | -0.31 | 0.74 | 0.03 | TRUE |
| 66 | GTEx | Pancreas | DNA2 | 0.12 | 0.06 | enet | 9 | 0.08 | 4.1e-04 | -8.6 | 9.3 | 1.7e-20 | 0.29 | 0.51 | 0.03 | FALSE |
| 67 | GTEx | Pancreas | STOX1 | 0.38 | 0.37 | lasso | 4 | 0.42 | 1.7e-19 | -6.4 | -6.3 | 3.1e-10 | 0.06 | 1.00 | 0.00 | FALSE |
| 68 | GTEx | Pituitary | DNA2 | 0.22 | 0.07 | enet | 8 | 0.10 | 1.8e-03 | -8.6 | 9.0 | 1.5e-19 | 0.29 | 0.27 | 0.05 | FALSE |
| 69 | GTEx | Skin Not Sun Exposed Suprapubic | DNA2 | 0.29 | 0.16 | lasso | 14 | 0.22 | 2.4e-12 | -8.7 | 8.7 | 3.5e-18 | 0.32 | 1.00 | 0.00 | FALSE |
| 70 | GTEx | Skin Sun Exposed Lower leg | DNA2 | 0.23 | 0.15 | lasso | 6 | 0.14 | 1.3e-11 | -8.7 | 9.2 | 4.8e-20 | 0.32 | 1.00 | 0.00 | FALSE |
| 71 | GTEx | Skin Sun Exposed Lower leg | STOX1 | 0.08 | 0.06 | lasso | 2 | 0.04 | 1.4e-04 | -6.4 | -7.5 | 8.2e-14 | 0.02 | 0.94 | 0.00 | FALSE |
| 72 | GTEx | Skin Sun Exposed Lower leg | RUFY2 | 0.05 | 0.06 | lasso | 6 | 0.04 | 2.5e-04 | -8.1 | 8.4 | 5.8e-17 | 0.30 | 0.81 | 0.09 | FALSE |
| 73 | GTEx | Spleen | DNA2 | 0.35 | 0.19 | lasso | 8 | 0.15 | 1.3e-04 | -8.2 | 7.6 | 3.0e-14 | 0.28 | 0.19 | 0.11 | FALSE |
| 74 | GTEx | Spleen | STOX1 | 0.30 | 0.39 | lasso | 3 | 0.33 | 3.3e-09 | -5.0 | -5.2 | 2.1e-07 | 0.09 | 0.97 | 0.00 | FALSE |
| 75 | GTEx | Stomach | DNA2 | 0.31 | 0.13 | lasso | 11 | 0.19 | 2.3e-09 | -8.7 | 9.0 | 1.7e-19 | 0.29 | 1.00 | 0.00 | FALSE |
| 76 | GTEx | Testis | SLC25A16 | 0.24 | 0.23 | lasso | 4 | 0.19 | 7.3e-09 | -8.7 | -9.0 | 1.5e-19 | -0.28 | 1.00 | 0.00 | FALSE |
| 77 | GTEx | Testis | STOX1 | 0.12 | 0.04 | lasso | 4 | 0.05 | 3.5e-03 | -6.2 | -5.9 | 4.2e-09 | 0.02 | 0.13 | 0.05 | FALSE |
| 78 | GTEx | Thyroid | DNA2 | 0.18 | 0.19 | lasso | 5 | 0.19 | 2.9e-14 | -8.7 | 8.8 | 1.9e-18 | 0.28 | 1.00 | 0.00 | FALSE |
| 79 | GTEx | Whole Blood | STOX1 | 0.13 | 0.19 | lasso | 6 | 0.18 | 1.9e-16 | -4.9 | -5.3 | 1.2e-07 | 0.08 | 1.00 | 0.00 | FALSE |
| 80 | METSIM | Adipose | DNA2 | 0.18 | 0.21 | lasso | 11 | 0.21 | 4.0e-31 | -8.7 | 8.7 | 2.8e-18 | 0.29 | 1.00 | 0.00 | FALSE |
| 81 | METSIM | Adipose | PBLD | 0.16 | 0.15 | lasso | 12 | 0.14 | 6.4e-21 | -8.8 | -9.1 | 6.3e-20 | -0.40 | 1.00 | 0.00 | TRUE |
| 82 | METSIM | Adipose | RUFY2 | 0.09 | 0.09 | lasso | 15 | 0.08 | 6.2e-12 | -8.2 | -8.6 | 7.0e-18 | -0.30 | 1.00 | 0.00 | FALSE |
| 83 | METSIM | Adipose | STOX1 | 0.04 | 0.06 | lasso | 8 | 0.05 | 1.3e-08 | -6.4 | -6.6 | 4.7e-11 | 0.03 | 1.00 | 0.00 | FALSE |
| 84 | NTR | Blood | KIAA1279 | 0.02 | 0.01 | enet | 20 | 0.01 | 9.2e-05 | -3.1 | -6.4 | 1.4e-10 | -0.11 | 0.38 | 0.18 | FALSE |
| 85 | NTR | Blood | SLC25A16 | 0.03 | 0.02 | enet | 16 | 0.03 | 1.7e-09 | -8.2 | -10.0 | 1.6e-23 | -0.32 | 1.00 | 0.00 | FALSE |
| 86 | ROSMAP | Brain Pre-frontal Cortex | PBLD | 0.04 | 0.01 | bslmm | 388 | 0.02 | 1.3e-03 | -8.4 | -10.8 | 3.6e-27 | -0.54 | 0.78 | 0.18 | FALSE |
| 87 | ROSMAP | Brain Pre-frontal Cortex | SLC25A16 | 0.17 | 0.11 | lasso | 6 | 0.15 | 2.9e-19 | -8.6 | -9.7 | 2.4e-22 | -0.32 | 1.00 | 0.00 | FALSE |
| 88 | ROSMAP | Brain Pre-frontal Cortex | DNA2 | 0.09 | 0.09 | lasso | 1 | 0.09 | 1.2e-11 | -8.7 | 8.7 | 4.7e-18 | 0.26 | 1.00 | 0.00 | FALSE |
| 89 | ROSMAP | Brain Pre-frontal Cortex | KIAA1279 | 0.10 | 0.11 | enet | 30 | 0.10 | 5.2e-13 | 5.9 | -6.0 | 1.7e-09 | -0.09 | 1.00 | 0.00 | FALSE |
| 90 | ROSMAP | Brain Pre-frontal Cortex | RUFY2 | 0.05 | 0.04 | enet | 18 | 0.04 | 6.9e-06 | -8.2 | -8.3 | 1.3e-16 | -0.30 | 1.00 | 0.00 | FALSE |
| 91 | YFS | Blood | SLC25A16 | 0.09 | 0.13 | lasso | 3 | 0.13 | 6.8e-39 | -8.2 | -8.9 | 7.5e-19 | -0.31 | 1.00 | 0.00 | FALSE |
| 92 | YFS | Blood | STOX1 | 0.24 | 0.16 | lasso | 7 | 0.22 | 1.8e-68 | -6.4 | -7.3 | 2.5e-13 | 0.03 | 1.00 | 0.00 | FALSE |
| 93 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | PBLD | 0.06 | 0.07 | lasso | 2 | 0.04 | 2.3e-04 | -9.3 | -9.3 | 2.1e-20 | -0.44 | 0.01 | 0.99 | FALSE |
| 94 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | SLC25A16 | 0.03 | 0.02 | blup | 42 | 0.02 | 6.7e-03 | -8.0 | -6.7 | 2.0e-11 | -0.27 | 0.08 | 0.42 | FALSE |
| 95 | The Cancer Genome Atlas | Breast Invasive Carcinoma | DNA2 | 0.11 | 0.02 | blup | 43 | 0.03 | 6.0e-07 | -8.2 | 6.5 | 9.1e-11 | 0.23 | 0.50 | 0.45 | FALSE |
| 96 | The Cancer Genome Atlas | Breast Invasive Carcinoma | PBLD | 0.03 | 0.01 | enet | 6 | 0.02 | 2.9e-05 | -8.8 | -8.9 | 7.8e-19 | -0.39 | 0.49 | 0.51 | FALSE |
| 97 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SLC25A16 | 0.01 | 0.02 | lasso | 2 | 0.01 | 5.5e-04 | -8.2 | -8.2 | 3.3e-16 | -0.30 | 0.24 | 0.33 | FALSE |
| 98 | The Cancer Genome Atlas | Breast Invasive Carcinoma | STOX1 | 0.05 | 0.04 | lasso | 6 | 0.05 | 1.0e-09 | -6.6 | -7.8 | 9.2e-15 | 0.01 | 0.01 | 0.99 | FALSE |
| 99 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | DNA2 | 0.08 | 0.09 | lasso | 1 | 0.06 | 7.3e-04 | -9.8 | 9.8 | 1.5e-22 | 0.35 | 0.02 | 0.85 | FALSE |
| 100 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | STOX1 | 0.18 | 0.08 | blup | 51 | 0.10 | 9.1e-06 | -4.9 | -5.5 | 4.9e-08 | 0.07 | 0.02 | 0.97 | FALSE |
| 101 | The Cancer Genome Atlas | Colon Adenocarcinoma | DNA2 | 0.14 | 0.02 | blup | 43 | 0.07 | 1.0e-04 | -8.3 | 5.5 | 3.6e-08 | 0.21 | 0.01 | 0.88 | FALSE |
| 102 | The Cancer Genome Atlas | Colon Adenocarcinoma | STOX1 | 0.20 | 0.14 | lasso | 2 | 0.13 | 6.8e-08 | -6.4 | -7.2 | 8.9e-13 | 0.01 | 0.35 | 0.63 | FALSE |
| 103 | The Cancer Genome Atlas | Esophageal Carcinoma | STOX1 | 0.27 | 0.23 | blup | 51 | 0.23 | 9.1e-08 | -6.4 | -6.9 | 5.5e-12 | 0.02 | 0.20 | 0.74 | FALSE |
| 104 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | ATOH7 | 0.05 | 0.01 | lasso | 3 | 0.02 | 2.6e-03 | -9.3 | 7.4 | 1.3e-13 | 0.45 | 0.04 | 0.05 | FALSE |
| 105 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | PBLD | 0.03 | 0.03 | lasso | 9 | 0.02 | 1.6e-03 | -9.5 | -9.7 | 3.5e-22 | -0.53 | 0.01 | 0.93 | FALSE |
| 106 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | STOX1 | 0.19 | 0.19 | lasso | 5 | 0.21 | 9.6e-23 | -4.9 | -6.7 | 2.8e-11 | 0.04 | 0.99 | 0.01 | FALSE |
| 107 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ATOH7 | 0.16 | 0.06 | enet | 15 | 0.09 | 3.7e-10 | -8.3 | 9.3 | 1.2e-20 | 0.44 | 0.99 | 0.00 | FALSE |
| 108 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | DNA2 | 0.11 | 0.09 | lasso | 8 | 0.09 | 5.7e-10 | -8.6 | 8.7 | 3.5e-18 | 0.27 | 1.00 | 0.00 | FALSE |
| 109 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | MYPN | 0.05 | 0.06 | lasso | 5 | 0.05 | 6.4e-06 | -5.6 | -5.9 | 3.9e-09 | -0.61 | 0.50 | 0.49 | FALSE |
| 110 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | PBLD | 0.10 | 0.03 | lasso | 3 | 0.04 | 2.2e-05 | -9.3 | -9.4 | 3.3e-21 | -0.44 | 0.01 | 0.99 | FALSE |
| 111 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | STOX1 | 0.23 | 0.27 | lasso | 8 | 0.27 | 7.3e-30 | -6.4 | -6.2 | 7.7e-10 | 0.05 | 0.98 | 0.02 | FALSE |
| 112 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ATOH7 | 0.08 | 0.04 | enet | 19 | 0.06 | 3.1e-04 | -8.4 | 11.3 | 1.5e-29 | 0.67 | 0.12 | 0.54 | TRUE |
| 113 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | DNA2 | 0.05 | 0.00 | blup | 43 | 0.00 | 3.0e-01 | -8.2 | 9.7 | 3.7e-22 | 0.34 | 0.04 | 0.51 | FALSE |
| 114 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | PBLD | 0.06 | 0.06 | enet | 6 | 0.06 | 2.5e-04 | -8.8 | -9.0 | 3.3e-19 | -0.38 | 0.22 | 0.35 | FALSE |
| 115 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | STOX1 | 0.28 | 0.29 | enet | 16 | 0.30 | 1.2e-17 | -6.4 | -6.9 | 5.2e-12 | 0.02 | 0.98 | 0.02 | FALSE |
| 116 | The Cancer Genome Atlas | Brain Lower Grade Glioma | DNA2 | 0.17 | 0.16 | enet | 3 | 0.16 | 8.7e-18 | -8.7 | 8.3 | 7.3e-17 | 0.25 | 1.00 | 0.00 | FALSE |
| 117 | The Cancer Genome Atlas | Brain Lower Grade Glioma | PBLD | 0.12 | 0.18 | enet | 10 | 0.18 | 6.7e-20 | -8.8 | -9.6 | 1.0e-21 | -0.40 | 0.23 | 0.77 | FALSE |
| 118 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SLC25A16 | 0.05 | 0.01 | blup | 42 | 0.02 | 2.9e-03 | -8.2 | -7.2 | 4.7e-13 | -0.21 | 0.06 | 0.83 | TRUE |
| 119 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | DNA2 | 0.08 | 0.05 | blup | 43 | 0.09 | 7.5e-05 | -8.0 | 8.7 | 5.0e-18 | 0.32 | 0.06 | 0.74 | FALSE |
| 120 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | STOX1 | 0.21 | 0.18 | blup | 51 | 0.25 | 6.6e-12 | -6.4 | -7.0 | 1.8e-12 | 0.01 | 0.53 | 0.47 | FALSE |
| 121 | The Cancer Genome Atlas | Lung Adenocarcinoma | SLC25A16 | 0.03 | 0.03 | lasso | 2 | 0.02 | 1.4e-03 | -8.2 | -7.1 | 1.6e-12 | -0.26 | 0.10 | 0.18 | FALSE |
| 122 | The Cancer Genome Atlas | Lung Adenocarcinoma | STOX1 | 0.13 | 0.10 | lasso | 3 | 0.09 | 1.0e-10 | -6.4 | -6.4 | 1.6e-10 | 0.03 | 0.97 | 0.03 | FALSE |
| 123 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PBLD | 0.02 | 0.01 | blup | 76 | 0.01 | 1.5e-02 | -8.8 | -9.5 | 2.8e-21 | -0.44 | 0.14 | 0.28 | FALSE |
| 124 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SLC25A16 | 0.02 | 0.02 | enet | 8 | 0.02 | 7.7e-04 | -9.8 | -9.5 | 2.1e-21 | -0.34 | 0.01 | 0.92 | FALSE |
| 125 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | STOX1 | 0.06 | 0.05 | lasso | 2 | 0.05 | 1.5e-06 | -6.4 | -6.4 | 1.6e-10 | 0.03 | 0.73 | 0.20 | FALSE |
| 126 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | STOX1 | 0.11 | 0.09 | blup | 51 | 0.10 | 2.0e-07 | -6.4 | -6.5 | 9.1e-11 | 0.03 | 0.35 | 0.60 | FALSE |
| 127 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | ATOH7 | 0.10 | -0.01 | blup | 59 | 0.04 | 1.1e-02 | -8.3 | 10.3 | 5.8e-25 | 0.63 | 0.04 | 0.16 | FALSE |
| 128 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | STOX1 | 0.49 | 0.35 | blup | 51 | 0.40 | 9.6e-18 | -6.4 | -6.6 | 3.2e-11 | 0.04 | 0.93 | 0.07 | FALSE |
| 129 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | DNA2 | 0.23 | 0.03 | enet | 8 | 0.07 | 1.3e-03 | -8.2 | 6.3 | 2.7e-10 | 0.22 | 0.18 | 0.16 | FALSE |
| 130 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | STOX1 | 0.27 | 0.13 | blup | 51 | 0.26 | 1.3e-10 | -4.9 | -6.5 | 1.0e-10 | 0.02 | 0.01 | 0.99 | FALSE |
| 131 | The Cancer Genome Atlas | Prostate Adenocarcinoma | ATOH7 | 0.02 | 0.01 | lasso | 3 | 0.00 | 1.3e-01 | -8.7 | 8.9 | 7.1e-19 | 0.47 | 0.10 | 0.03 | FALSE |
| 132 | The Cancer Genome Atlas | Prostate Adenocarcinoma | DNA2 | 0.10 | 0.12 | lasso | 1 | 0.12 | 2.1e-12 | -8.7 | 8.7 | 4.7e-18 | 0.26 | 1.00 | 0.00 | FALSE |
| 133 | The Cancer Genome Atlas | Prostate Adenocarcinoma | PBLD | 0.03 | 0.01 | blup | 76 | 0.01 | 1.3e-02 | -8.7 | -9.7 | 4.7e-22 | -0.47 | 0.05 | 0.44 | FALSE |
| 134 | The Cancer Genome Atlas | Prostate Adenocarcinoma | SLC25A16 | 0.05 | 0.02 | blup | 42 | 0.05 | 5.5e-06 | -1.7 | -5.4 | 5.7e-08 | -0.18 | 0.71 | 0.11 | FALSE |
| 135 | The Cancer Genome Atlas | Prostate Adenocarcinoma | STOX1 | 0.25 | 0.21 | enet | 10 | 0.21 | 6.3e-22 | -6.4 | -6.6 | 4.0e-11 | 0.03 | 0.99 | 0.01 | FALSE |
| 136 | The Cancer Genome Atlas | Rectum Adenocarcinoma | STOX1 | 0.23 | 0.17 | blup | 51 | 0.21 | 1.2e-05 | -6.7 | -7.9 | 4.0e-15 | -0.04 | 0.01 | 0.90 | FALSE |
| 137 | The Cancer Genome Atlas | Soft Tissue Sarcoma | SLC25A16 | 0.07 | 0.03 | blup | 42 | 0.02 | 1.7e-02 | -9.8 | -9.9 | 2.6e-23 | -0.32 | 0.01 | 0.94 | TRUE |
| 138 | The Cancer Genome Atlas | Soft Tissue Sarcoma | STOX1 | 0.19 | 0.02 | enet | 13 | 0.12 | 1.8e-07 | -5.9 | -7.6 | 3.9e-14 | -0.07 | 0.37 | 0.56 | FALSE |
| 139 | The Cancer Genome Atlas | Stomach Adenocarcinoma | ATOH7 | 0.05 | 0.05 | lasso | 2 | 0.05 | 8.6e-05 | -8.8 | 8.8 | 9.6e-19 | 0.59 | 0.11 | 0.49 | FALSE |
| 140 | The Cancer Genome Atlas | Stomach Adenocarcinoma | STOX1 | 0.23 | 0.20 | lasso | 4 | 0.19 | 4.8e-14 | -6.4 | -6.0 | 2.5e-09 | 0.06 | 0.98 | 0.02 | FALSE |
| 141 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | DNA2 | 0.14 | 0.07 | blup | 43 | 0.08 | 8.6e-04 | -8.7 | -8.9 | 4.7e-19 | -0.31 | 0.08 | 0.47 | FALSE |
| 142 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | STOX1 | 0.17 | 0.10 | enet | 9 | 0.14 | 1.2e-05 | -5.1 | -6.0 | 1.6e-09 | -0.03 | 0.13 | 0.59 | FALSE |
| 143 | The Cancer Genome Atlas | Thyroid Carcinoma | DNA2 | 0.05 | 0.03 | enet | 5 | 0.03 | 2.9e-04 | -8.6 | 8.2 | 3.3e-16 | 0.24 | 0.02 | 0.43 | FALSE |
| 144 | The Cancer Genome Atlas | Thyroid Carcinoma | PBLD | 0.06 | 0.09 | lasso | 2 | 0.09 | 1.1e-08 | -8.8 | -8.9 | 7.4e-19 | -0.38 | 0.39 | 0.61 | FALSE |
| 145 | The Cancer Genome Atlas | Thyroid Carcinoma | SLC25A16 | 0.05 | 0.05 | lasso | 3 | 0.04 | 3.8e-05 | -8.2 | -8.2 | 3.5e-16 | -0.29 | 0.06 | 0.82 | FALSE |
| 146 | The Cancer Genome Atlas | Thyroid Carcinoma | STOX1 | 0.19 | 0.12 | lasso | 6 | 0.11 | 5.0e-11 | -5.0 | -6.2 | 6.4e-10 | 0.07 | 0.27 | 0.73 | FALSE |