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chr15:84,151,637-85,883,064

Best TWAS P=5.89e-11 · Best GWAS P=9.1e-12 conditioned to 0.298

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
20	GTEx	Prostate	RP11-182J1.16	0.24	0.06	enet	27	0.08	6.2e-03	1.1	-6.5	5.9e-11	0.37	0.08	0.13	TRUE
12	GTEx	Colon Transverse	AC103965.1	0.15	0.07	enet	33	0.06	7.1e-04	-5.7	-6.2	6.7e-10	0.35	0.17	0.16	TRUE
25	GTEx	Small Intestine Terminal Ileum	RP11-182J1.14	0.26	0.01	enet	27	0.12	1.3e-03	-6.4	5.7	9.4e-09	-0.42	0.05	0.28	TRUE
22	GTEx	Skin Not Sun Exposed Suprapubic	AC103965.1	0.23	0.15	lasso	8	0.19	1.9e-10	4.4	-5.4	7.2e-08	0.24	0.94	0.03	TRUE
24	GTEx	Skin Sun Exposed Lower leg	AC103965.1	0.33	0.17	enet	24	0.23	4.8e-19	4.3	-6.2	4.4e-10	0.39	1.00	0.00	FALSE
13	GTEx	Colon Transverse	CSPG4P11	0.10	0.10	lasso	4	0.08	1.2e-04	-5.7	-5.9	2.8e-09	0.25	0.24	0.09	FALSE
19	GTEx	Pancreas	RP11-182J1.16	0.08	-0.01	enet	11	-0.01	7.9e-01	-5.7	-5.9	3.3e-09	0.45	0.05	0.14	FALSE
1	CommonMind	Brain Pre-frontal Cortex	LOC388152	0.14	0.14	enet	20	0.18	6.7e-22	4.4	-5.8	8.5e-09	0.38	1.00	0.00	FALSE
21	GTEx	Prostate	CSPG4P11	0.34	0.07	enet	13	0.18	2.3e-05	-2.9	-5.8	9.0e-09	0.24	0.16	0.23	FALSE
26	GTEx	Spleen	GOLGA6L4	0.55	0.20	enet	19	0.40	2.6e-11	-5.8	-5.7	9.7e-09	0.36	0.62	0.31	FALSE
4	GTEx	Artery Tibial	SCAND2P	0.12	0.05	enet	16	0.08	8.7e-07	-3.1	-5.7	1.0e-08	0.37	0.35	0.49	FALSE
23	GTEx	Skin Sun Exposed Lower leg	ZSCAN2	0.08	0.02	enet	13	0.03	1.4e-03	-5.7	5.7	1.0e-08	-0.20	0.03	0.92	FALSE
11	GTEx	Cells Transformed fibroblasts	AC103965.1	0.15	0.09	lasso	7	0.11	1.3e-08	4.4	-5.7	1.1e-08	0.38	0.97	0.02	FALSE
10	GTEx	Breast Mammary Tissue (Male)	AC103965.1	0.24	0.14	lasso	4	0.11	1.4e-03	4.2	-5.6	2.7e-08	0.42	0.09	0.44	FALSE
8	GTEx	Brain Cortex	GOLGA6L4	0.42	0.21	lasso	7	0.28	2.8e-08	-5.6	-5.6	2.8e-08	0.56	0.26	0.61	FALSE
2	GTEx	Adipose Subcutaneous	AC103965.1	0.24	0.14	lasso	6	0.15	2.6e-12	4.4	-5.5	2.9e-08	0.30	1.00	0.00	FALSE
14	GTEx	Esophagus Mucosa	AC103965.1	0.20	0.19	enet	47	0.16	8.4e-11	4.3	-5.5	3.2e-08	0.34	1.00	0.00	FALSE
17	GTEx	Lung	AC103965.1	0.20	0.14	lasso	4	0.16	1.8e-12	4.3	-5.5	3.4e-08	0.32	1.00	0.00	FALSE
3	GTEx	Adipose Subcutaneous	CSPG4P11	0.19	0.17	lasso	5	0.20	7.9e-16	4.4	-5.4	6.0e-08	0.29	1.00	0.00	FALSE
18	GTEx	Nerve Tibial	AC103965.1	0.20	0.22	enet	17	0.27	5.1e-19	4.3	-5.4	6.8e-08	0.38	1.00	0.00	FALSE
15	GTEx	Esophagus Mucosa	RP11-182J1.16	0.20	0.05	lasso	5	0.10	1.8e-07	4.0	-5.4	6.9e-08	0.27	0.89	0.02	FALSE
16	GTEx	Esophagus Mucosa	CSPG4P11	0.21	0.01	enet	28	0.08	3.7e-06	-5.7	-5.4	7.3e-08	0.38	0.78	0.13	FALSE
28	GTEx	Whole Blood	GOLGA6L4	0.12	0.08	enet	16	0.11	2.1e-10	-3.5	-5.4	7.9e-08	0.39	0.96	0.04	FALSE
5	GTEx	Artery Tibial	AC103965.1	0.27	0.26	enet	31	0.30	1.8e-23	4.3	-5.3	1.1e-07	0.40	1.00	0.00	FALSE
9	GTEx	Breast Mammary Tissue (Male)	GOLGA6L4	0.23	0.07	lasso	2	0.12	8.3e-04	-5.6	-5.3	1.5e-07	0.41	0.08	0.19	FALSE
27	GTEx	Thyroid	AC103965.1	0.30	0.25	lasso	7	0.25	1.8e-19	4.4	-5.2	2.1e-07	0.26	1.00	0.00	FALSE
7	GTEx	Brain Cerebellum	AC103965.1	0.13	0.02	enet	21	0.01	2.1e-01	4.4	-5.2	2.6e-07	0.37	0.09	0.30	FALSE
6	GTEx	Artery Tibial	CSPG4P11	0.16	0.24	lasso	4	0.23	3.0e-18	4.3	-5.1	2.9e-07	0.35	1.00	0.00	FALSE
29	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	UBE2Q2P1	0.10	0.00	blup	22	0.03	1.9e-02	-5.1	5.1	3.1e-07	-0.24	0.00	0.42	FALSE