TWAS
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Traits
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Leg fat percentage (right)
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chr1:114,893,146-116,330,558
Best TWAS P=2.09e-08 · Best GWAS P=1.86e-06 conditioned to 0.507
115M
115.2M
115.4M
115.6M
115.8M
116M
116.2M
116.4M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Uterine Corpus Endometrial Carcinoma
SIKE1
0.44
0.09
lasso
7
0.13
1.9e-04
-4.3
-5.6
2.1e-08
0.78
0.00
0.07
TRUE
1
NTR
Blood
TSPAN2
0.03
0.01
bslmm
494
0.02
9.6e-07
-4.5
-5.1
2.9e-07
0.55
0.01
0.91
FALSE