TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Leg fat mass (left)
:
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chr17:77,821,891-79,697,383
Best TWAS P=3.72e-14 · Best GWAS P=4.17e-13 conditioned to 0.727
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Muscle Skeletal
RPTOR
0.14
0.05
enet
27
0.09
8.4e-09
-6.4
-7.6
3.7e-14
0.62
0.46
0.54
TRUE
1
GTEx
Brain Cerebellar Hemisphere
BAIAP2
0.36
0.01
enet
22
0.02
8.5e-02
4.0
-6.5
8.4e-11
0.43
0.04
0.14
TRUE
3
GTEx
Muscle Skeletal
CTD-2561B21.4
0.06
0.04
lasso
7
0.03
2.3e-04
-6.3
-6.8
8.6e-12
0.64
0.14
0.79
FALSE