[Hub]/) : Traits : Leg fat-free mass (left) :

chr12:55,601,472-57,844,049

Best TWAS P=1.14e-14 · Best GWAS P=2.01e-14 conditioned to NaN

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex PRIM1 0.31 0.24 enet 7 0.24 1.1e-28 -6.7 6.9 4.3e-12 -0.01 0.00 1.00 TRUE
2 CommonMind Brain Pre-frontal Cortex RPS26 0.48 0.62 lasso 5 0.63 5.9e-99 -5.7 -5.6 1.9e-08 0.64 1.00 0.00 FALSE
3 GTEx Artery Tibial RPS26 0.07 0.02 enet 5 0.01 3.5e-02 -5.7 -5.5 3.0e-08 0.65 0.24 0.18 FALSE
4 GTEx Brain Cortex SUOX 0.16 0.11 lasso 4 0.10 1.1e-03 -5.3 5.4 5.7e-08 -0.68 0.07 0.27 FALSE
5 GTEx Breast Mammary Tissue RPS26 0.29 0.05 enet 37 0.12 9.4e-07 -5.7 -6.8 1.1e-11 0.63 0.22 0.77 FALSE
6 GTEx Breast Mammary Tissue (Female) RPS26 0.20 0.11 lasso 3 0.10 6.6e-04 -5.3 -7.7 1.1e-14 0.84 0.01 0.86 TRUE
7 GTEx Colon Sigmoid SUOX 0.23 0.18 lasso 4 0.15 7.9e-06 -5.3 5.2 2.6e-07 -0.64 0.37 0.58 FALSE
8 GTEx Colon Sigmoid RP11-977G19.11 0.22 0.00 enet 33 0.04 1.5e-02 3.6 -5.8 6.8e-09 0.24 0.13 0.07 TRUE
9 GTEx Esophagus Gastroesophageal Junction SUOX 0.20 0.16 lasso 5 0.19 2.7e-07 -5.3 5.6 2.6e-08 -0.66 0.63 0.31 FALSE
10 GTEx Esophagus Gastroesophageal Junction WIBG 0.16 0.02 lasso 5 0.04 1.9e-02 1.4 5.5 4.2e-08 -0.35 0.04 0.25 FALSE
11 GTEx Esophagus Muscularis SUOX 0.24 0.19 enet 16 0.15 2.3e-09 -5.3 5.3 9.5e-08 -0.62 0.99 0.01 FALSE
12 GTEx Heart Atrial Appendage SUOX 0.09 0.10 enet 8 0.09 1.1e-04 -5.7 5.5 3.5e-08 -0.68 0.14 0.64 FALSE
13 GTEx Muscle Skeletal RAB5B 0.29 0.32 lasso 4 0.33 1.3e-33 -6.3 6.5 8.6e-11 -0.66 0.92 0.08 FALSE
14 GTEx Muscle Skeletal SUOX 0.11 0.04 lasso 7 0.04 4.4e-05 -5.3 5.6 2.2e-08 -0.67 0.29 0.63 FALSE
15 GTEx Muscle Skeletal AC034102.1 0.28 0.31 lasso 4 0.31 2.3e-31 -6.3 6.5 8.4e-11 -0.66 0.91 0.09 TRUE
16 GTEx Prostate SUOX 0.22 0.04 enet 11 0.05 2.3e-02 -5.3 6.3 2.6e-10 -0.67 0.10 0.39 FALSE
17 GTEx Skin Not Sun Exposed Suprapubic SUOX 0.10 0.14 lasso 2 0.12 2.5e-07 -5.3 5.3 1.2e-07 -0.67 0.49 0.45 FALSE
18 GTEx Skin Sun Exposed Lower leg SUOX 0.23 0.30 lasso 3 0.29 1.9e-24 -5.3 5.5 3.2e-08 -0.68 1.00 0.00 FALSE
19 GTEx Spleen SUOX 0.34 0.31 enet 15 0.28 5.4e-08 -5.3 5.2 2.0e-07 -0.65 0.14 0.76 FALSE
20 GTEx Stomach RPS26 0.16 0.08 enet 5 0.05 1.8e-03 -5.3 -5.3 1.5e-07 0.61 0.11 0.46 FALSE
21 GTEx Testis SUOX 0.27 0.18 lasso 14 0.18 1.4e-08 -5.3 5.8 8.4e-09 -0.67 0.71 0.29 FALSE
22 GTEx Thyroid SUOX 0.37 0.40 lasso 7 0.38 5.4e-31 -5.3 5.5 4.5e-08 -0.70 1.00 0.00 TRUE
23 GTEx Whole Blood RPS26 0.05 0.05 lasso 1 0.05 3.4e-05 -5.3 -5.3 1.3e-07 0.68 0.22 0.68 FALSE
24 METSIM Adipose IKZF4 0.04 0.04 enet 3 0.04 1.0e-06 -5.4 -5.5 4.1e-08 0.61 0.99 0.01 FALSE
25 METSIM Adipose RPS26 0.30 0.40 lasso 5 0.41 7.2e-66 -5.4 -5.6 2.4e-08 0.62 1.00 0.00 FALSE
26 The Cancer Genome Atlas Bladder Urothelial Carcinoma RPS26 0.14 0.22 lasso 2 0.23 4.8e-19 -5.4 -5.5 3.1e-08 0.62 0.81 0.19 FALSE
27 The Cancer Genome Atlas Breast Invasive Carcinoma RPS26 0.30 0.44 enet 10 0.45 5.2e-104 -5.7 -5.9 4.3e-09 0.64 0.83 0.17 FALSE
28 The Cancer Genome Atlas Cervical Squamous Cell Carcinoma RPS26 0.23 0.40 lasso 2 0.39 1.5e-20 -5.7 -5.9 4.0e-09 0.64 0.43 0.57 FALSE
29 The Cancer Genome Atlas Colon Adenocarcinoma RPS26 0.43 0.48 lasso 4 0.47 1.8e-30 -5.7 -6.0 2.1e-09 0.65 0.71 0.29 FALSE
30 The Cancer Genome Atlas Esophageal Carcinoma RPS26 0.19 0.13 lasso 5 0.11 2.4e-04 -5.7 -5.8 5.0e-09 0.65 0.01 0.96 FALSE
31 The Cancer Genome Atlas Glioblastoma Multiforme RPS26 0.41 0.38 enet 9 0.39 7.9e-13 -5.4 -5.6 1.8e-08 0.63 0.42 0.58 FALSE
32 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma RPS26 0.17 0.29 lasso 4 0.29 6.2e-33 -5.4 -5.6 2.0e-08 0.63 0.92 0.08 FALSE
33 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma SPRYD4 0.03 0.01 blup 34 0.02 1.0e-03 -3.7 -5.3 1.2e-07 0.00 0.01 0.20 TRUE
34 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma RPS26 0.27 0.38 enet 8 0.40 5.0e-24 -5.7 -5.8 6.9e-09 0.66 0.85 0.15 FALSE
35 The Cancer Genome Atlas Brain Lower Grade Glioma ERBB3 0.07 0.02 blup 29 0.05 2.1e-06 -6.7 -5.3 1.4e-07 0.39 0.00 1.00 FALSE
36 The Cancer Genome Atlas Brain Lower Grade Glioma RPS26 0.31 0.53 enet 8 0.55 1.7e-74 -5.7 -5.7 1.1e-08 0.65 0.88 0.12 FALSE
37 The Cancer Genome Atlas Liver Hepatocellular Carcinoma RPS26 0.18 0.31 lasso 2 0.29 3.9e-14 -5.7 -5.6 1.8e-08 0.63 0.84 0.16 FALSE
38 The Cancer Genome Atlas Lung Adenocarcinoma RAB5B 0.03 0.02 enet 7 0.02 4.3e-03 -6.3 -5.7 1.5e-08 0.57 0.02 0.27 FALSE
39 The Cancer Genome Atlas Lung Adenocarcinoma RPS26 0.26 0.45 enet 9 0.47 3.6e-61 -5.7 -5.9 4.3e-09 0.66 0.86 0.14 FALSE
40 The Cancer Genome Atlas Lung Squamous Cell Carcinoma RPS26 0.22 0.31 lasso 3 0.31 1.6e-35 -5.7 -6.0 2.0e-09 0.65 0.83 0.17 TRUE
41 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma RPS26 0.30 0.20 lasso 4 0.24 3.9e-16 -5.7 -6.3 4.1e-10 0.67 0.07 0.93 FALSE
42 The Cancer Genome Atlas Pancreatic Adenocarcinoma ESYT1 0.16 0.02 blup 33 0.05 5.5e-03 2.7 -6.0 2.2e-09 0.30 0.01 0.67 TRUE
43 The Cancer Genome Atlas Pancreatic Adenocarcinoma RPS26 0.36 0.44 lasso 7 0.42 2.4e-19 -5.4 -5.4 5.3e-08 0.64 0.93 0.07 FALSE
44 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma RPS26 0.47 0.43 lasso 2 0.44 3.2e-19 -5.3 -5.5 3.8e-08 0.67 0.91 0.09 FALSE
45 The Cancer Genome Atlas Prostate Adenocarcinoma RPS26 0.33 0.52 enet 9 0.54 5.6e-66 -5.7 -5.8 6.4e-09 0.65 0.84 0.16 FALSE
46 The Cancer Genome Atlas Rectum Adenocarcinoma RPS26 0.24 0.18 lasso 2 0.20 1.9e-05 -5.7 -5.6 2.0e-08 0.66 0.06 0.51 FALSE
47 The Cancer Genome Atlas Soft Tissue Sarcoma RPS26 0.23 0.31 lasso 3 0.30 2.4e-18 -5.7 -5.8 7.7e-09 0.64 0.66 0.34 FALSE
48 The Cancer Genome Atlas Skin Cutaneous Melanoma RPS26 0.28 0.15 lasso 2 0.17 3.0e-05 -6.2 -6.1 1.0e-09 0.69 0.01 0.94 FALSE
49 The Cancer Genome Atlas Stomach Adenocarcinoma RPS26 0.19 0.32 lasso 5 0.34 2.0e-25 -5.4 -5.7 1.1e-08 0.63 0.92 0.08 FALSE
50 The Cancer Genome Atlas Testicular Germ Cell Tumors RPS26 0.46 0.64 lasso 4 0.65 8.5e-30 -5.7 -6.0 2.4e-09 0.64 0.40 0.60 FALSE
51 The Cancer Genome Atlas Uterine Corpus Endometrial Carcinoma RPS26 0.17 0.19 lasso 4 0.18 1.3e-05 -5.7 -5.6 1.8e-08 0.67 0.03 0.95 FALSE