[Hub]/) : Traits : Arm fat-free mass (right) : ← →

chr5:175,662,866-177,260,129

Best TWAS P=1.16e-13 · Best GWAS P=1.92e-14 conditioned to 1

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
21	GTEx	Liver	PRELID1	0.22	0.25	lasso	3	0.24	2.4e-07	7.7	-7.4	1.2e-13	-0.98	0.00	1.00	TRUE
5	GTEx	Artery Tibial	RAB24	0.18	0.09	lasso	3	0.07	2.3e-06	5.6	6.8	9.3e-12	0.49	0.88	0.12	TRUE
38	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	PRELID1	0.24	0.11	lasso	5	0.10	1.2e-11	6.6	-6.5	6.6e-11	-0.88	0.50	0.50	TRUE
15	GTEx	Esophagus Mucosa	UIMC1	0.08	0.00	lasso	5	0.00	3.5e-01	-6.1	-6.3	3.1e-10	-0.19	0.13	0.04	TRUE
1	CommonMind	Brain Pre-frontal Cortex	RAB24	0.14	0.06	enet	14	0.09	4.2e-11	5.6	6.2	4.1e-10	0.18	0.96	0.04	TRUE
12	GTEx	Colon Sigmoid	MXD3	0.35	0.27	lasso	9	0.29	6.3e-11	6.4	6.2	6.1e-10	0.90	0.04	0.96	TRUE
37	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	LMAN2	0.04	0.00	blup	46	0.00	1.6e-01	7.7	-5.7	1.3e-08	-0.77	0.00	0.91	TRUE
41	The Cancer Genome Atlas	Prostate Adenocarcinoma	MXD3	0.04	0.02	blup	40	0.03	2.8e-04	6.4	5.5	3.0e-08	0.84	0.10	0.77	TRUE
30	GTEx	Small Intestine Terminal Ileum	PRELID1	0.47	0.16	enet	10	0.13	7.6e-04	7.7	-7.1	1.6e-12	-0.94	0.00	0.97	FALSE
31	GTEx	Thyroid	MXD3	0.31	0.17	lasso	8	0.24	1.1e-18	6.4	7.0	2.1e-12	0.91	0.00	1.00	FALSE
27	GTEx	Skin Not Sun Exposed Suprapubic	MXD3	0.22	0.18	lasso	3	0.17	1.8e-09	6.4	7.0	3.3e-12	0.94	0.01	0.99	FALSE
29	GTEx	Skin Sun Exposed Lower leg	MXD3	0.19	0.14	lasso	6	0.12	4.2e-10	7.7	6.9	4.6e-12	0.91	0.00	1.00	FALSE
24	GTEx	Nerve Tibial	RAB24	0.27	0.08	enet	32	0.17	6.3e-12	2.1	6.8	7.2e-12	0.52	0.74	0.15	FALSE
10	GTEx	Breast Mammary Tissue	MXD3	0.26	0.08	lasso	5	0.10	1.3e-05	6.4	6.7	2.1e-11	0.86	0.00	1.00	FALSE
25	GTEx	Nerve Tibial	MXD3	0.26	0.17	lasso	7	0.28	6.9e-20	6.4	6.6	3.8e-11	0.87	0.04	0.96	FALSE
39	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	PRELID1	0.33	0.08	enet	4	0.08	2.7e-05	6.4	-6.5	6.2e-11	-0.90	0.15	0.72	FALSE
6	GTEx	Artery Tibial	MXD3	0.12	0.13	enet	5	0.12	7.0e-10	6.4	6.5	6.4e-11	0.89	0.18	0.81	FALSE
32	METSIM	Adipose	MXD3	0.18	0.18	lasso	3	0.21	1.3e-30	6.4	6.5	6.5e-11	0.86	0.73	0.27	FALSE
22	GTEx	Lung	MXD3	0.20	0.12	lasso	10	0.12	1.8e-09	6.4	6.5	6.6e-11	0.85	0.12	0.88	FALSE
18	GTEx	Esophagus Muscularis	MXD3	0.27	0.20	enet	10	0.24	1.6e-14	6.4	6.5	7.1e-11	0.91	0.08	0.92	FALSE
19	GTEx	Heart Atrial Appendage	MXD3	0.33	0.15	enet	24	0.16	1.5e-07	6.4	6.5	8.2e-11	0.76	0.00	1.00	FALSE
13	GTEx	Colon Transverse	PRELID1	0.31	0.28	lasso	4	0.26	1.1e-12	6.4	-6.5	9.0e-11	-0.90	0.03	0.97	FALSE
11	GTEx	Breast Mammary Tissue (Female)	MXD3	0.23	0.08	lasso	3	0.09	1.1e-03	7.7	6.5	1.0e-10	0.82	0.01	0.92	FALSE
2	GTEx	Adipose Subcutaneous	RAB24	0.17	0.08	enet	26	0.14	1.7e-11	5.6	6.4	1.3e-10	0.44	0.97	0.03	FALSE
35	The Cancer Genome Atlas	Colon Adenocarcinoma	RAB24	0.08	0.04	enet	7	0.06	3.4e-04	-2.9	6.4	1.5e-10	0.57	0.04	0.10	FALSE
20	GTEx	Heart Left Ventricle	MXD3	0.17	0.03	lasso	3	0.03	1.5e-02	6.4	6.4	1.6e-10	0.86	0.10	0.34	FALSE
7	GTEx	Brain Cerebellum	MXD3	0.28	0.31	lasso	2	0.30	1.6e-09	6.4	6.4	2.1e-10	0.87	0.09	0.90	FALSE
3	GTEx	Adipose Subcutaneous	MXD3	0.16	0.05	enet	13	0.06	1.7e-05	6.4	6.3	3.0e-10	0.77	0.02	0.98	FALSE
17	GTEx	Esophagus Mucosa	MXD3	0.16	0.14	lasso	8	0.15	1.7e-10	6.4	6.2	4.0e-10	0.85	0.26	0.74	FALSE
9	GTEx	Brain Nucleus accumbens basal ganglia	MXD3	0.24	0.14	enet	10	0.25	2.9e-07	6.4	6.2	4.2e-10	0.83	0.05	0.82	FALSE
28	GTEx	Skin Sun Exposed Lower leg	PRELID1	0.06	0.02	enet	5	0.03	3.4e-03	6.4	-6.2	5.3e-10	-0.92	0.01	0.99	FALSE
40	The Cancer Genome Atlas	Liver Hepatocellular Carcinoma	PRELID1	0.08	0.10	lasso	4	0.07	2.9e-04	5.8	-6.0	1.4e-09	-0.83	0.02	0.92	FALSE
23	GTEx	Nerve Tibial	FGFR4	0.44	0.48	lasso	7	0.47	2.1e-37	-6.1	-6.0	2.4e-09	-0.19	0.98	0.02	FALSE
26	GTEx	Pituitary	MXD3	0.25	0.20	lasso	6	0.16	7.5e-05	5.2	5.8	6.1e-09	0.74	0.04	0.91	FALSE
16	GTEx	Esophagus Mucosa	FGFR4	0.18	0.16	enet	8	0.16	9.2e-11	-6.1	-5.8	8.3e-09	-0.21	0.98	0.02	FALSE
4	GTEx	Adipose Visceral Omentum	MXD3	0.33	0.06	lasso	6	0.05	9.1e-04	6.4	5.7	1.4e-08	0.84	0.04	0.88	FALSE
8	GTEx	Brain Cortex	MXD3	0.47	0.20	lasso	10	0.22	7.7e-07	6.4	5.5	3.1e-08	0.78	0.06	0.59	FALSE
33	METSIM	Adipose	RAB24	0.05	0.02	lasso	4	0.02	1.2e-03	5.6	5.4	5.2e-08	0.22	0.49	0.11	FALSE
34	YFS	Blood	MXD3	0.04	0.03	lasso	4	0.04	5.8e-13	-2.4	5.3	1.0e-07	0.58	0.39	0.61	FALSE
14	GTEx	Esophagus Gastroesophageal Junction	MXD3	0.17	0.12	lasso	3	0.08	9.5e-04	6.4	5.3	1.1e-07	0.78	0.03	0.62	FALSE
36	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	FGFR4	0.08	0.06	blup	46	0.07	2.5e-08	2.7	-5.3	1.2e-07	-0.39	0.89	0.07	FALSE